myRT

myRT report for GCA_013004475.1_ASM1300447v1

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Seq: JABELX010000025.1 Nocardia uniformis strain JCM 3224 W9869_24, whole genome shotgun sequence (66845 bp)
Overview 1 RT 1: 30208-37553 bp Neighborhood of RT #1 [30208, 37561] TIGR00740 DUF4096 RVT-GII GIIM RVT-GII RVT-GII alaS Feature: gene Location: 30208-30858 bp Feature: domain Description: TIGR00740 Location: 30220-30856 bp Feature: domain Description: TIGR00740 Location: 30220-30856 bp Feature: gene Location: 31527-31805 bp Feature: domain Description: DUF4096 Location: 31563-31689 bp Feature: domain Description: DUF4096 Location: 31 563-31 689 bp Feature: gene Location: 32611-33201 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32617-32815 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3261 7-3281 5 bp Feature: domain Description: GIIM Note: maturase Location: 32896-33100 bp Feature: domain Description: GIIM Note: maturase Location: 32896-331 00 bp Feature: gene Location: 33237-33464 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 33240-33462 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 33240-33462 bp Feature: gene Location: 33461-33865 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 33671-33842 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 33671 -33842 bp Feature: gene Location: 34223-34396 bp Feature: gene Location: 34895-37561 bp Feature: domain Description: alaS Location: 34907-37553 bp Feature: domain Description: alaS Location: 34907-37553 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TIGR00740 (tRNA (cmo5U34)-methyltransferase), DUF4096 (pfam13340), RVT-GII, GIIM (pfam08388), alaS (TIGR00344)

Seq: JABELX010000009.1 Nocardia uniformis strain JCM 3224 W9869_8, whole genome shotgun sequence (374048 bp)
Overview 1 RT 1: 194536-199295 bp Neighborhood of RT #1 [194536, 199957] PS_pyruv_trans YjbM RVT-GII group_II_RT_mat DUF397 HTH_31 Feature: gene Location: 194536-195753 bp Feature: domain Description: PS_pyruv_trans Location: 194587-195469 bp Feature: domain Description: PS_pyruv_trans Location: 194587-195469 bp Feature: gene Location: 195916-196683 bp Feature: domain Description: YjbM Location: 196018-196621 bp Feature: domain Description: YjbM Location: 196018-19662 1 bp Feature: gene Location: 196911-198248 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 197232-197904 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1972 32 -197904 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 197949-198093 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 197949-198093 bp Feature: gene Location: 198864-199070 bp Feature: domain Description: DUF397 Location: 198888-199044 bp Feature: domain Description: DUF397 Location: 198888-199044 bp Feature: gene Location: 199067-199957 bp Feature: domain Description: HTH_31 Location: 199112-199295 bp Feature: domain Description: HTH_31 Location: 199112 -1992 95 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PS_pyruv_trans (pfam04230), YjbM (COG2357), RVT-GII, group_II_RT_mat (TIGR04416), DUF397 (pfam04149), HTH_31 (pfam13560)