myRT

myRT report for GCA_013009275.1_ASM1300927v1

Download annotations/find similar RTs

Seq: JABCRY010000015.1 Streptococcus suis strain BJBY14 NODE_15_length_61027_cov_117.466, whole genome shotgun sequence (61027 bp)
Overview 1 RT 1: 39940-50130 bp Neighborhood of RT #1 [39940, 50130] KOG1000 RVT-GII Intron_maturas2 HNHc N6_Mtase COG4646 Feature: gene Location: 39940-40239 bp Feature: gene Location: 40310-41653 bp Feature: domain Description: KOG1000 Location: 40589-40904 bp Feature: domain Description: KOG1 000 Location: 40589-40904 bp Feature: gene Location: 41791-43569 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 42052-42844 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 42052-42844 bp Feature: domain Description: Intron_maturas2 Location: 42949-43180 bp Feature: domain Description: Intron_maturas2 Location: 42949-431 80 bp Feature: domain Description: HNHc Note: nucleases Location: 43345-43531 bp Feature: domain Description: HNHc Note: nucleases Location: 43345-43531 bp Feature: gene Location: 44067-49529 bp Feature: domain Description: N6_Mtase Location: 46080-46671 bp Feature: domain Description: N6_Mtase Location: 46080-46671 bp Feature: domain Description: COG4646 Location: 47262-49386 bp Feature: domain Description: COG4646 Location: 47262-49386 bp Feature: gene Location: 49579-50130 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT KOG1000 (KOG1000, Chromatin remodeling protein HARP/SMARCAL1, DEAD-box superfamily ), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), N6_Mtase (pfam02384), COG4646 (Adenine-specific DNA methylase, N12 class )