myRT

myRT report for GCA_013009425.1_ASM1300942v1

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Seq: JABCRQ010000003.1 Streptococcus suis strain HNBY57 NODE_3_length_105251_cov_140.629, whole genome shotgun sequence (105251 bp)
Overview 1 RT 1: 76-9066 bp Neighborhood of RT #1 [76, 9066] SF2_C_SNF RVT-GII Intron_maturas2 HNHc N6_Mtase COG4646 Feature: gene Location: 76-591 bp Feature: domain Description: SF2_C_SNF Location: 322-508 bp Feature: domain Description: SF2_C_SNF Location: 322-508 bp Feature: gene Location: 729-2507 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 990-1782 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 990-1 782 bp Feature: domain Description: Intron_maturas2 Location: 1887-2118 bp Feature: domain Description: Intron_maturas2 Location: 1 887-21 1 8 bp Feature: domain Description: HNHc Note: nucleases Location: 2283-2469 bp Feature: domain Description: HNHc Note: nucleases Location: 2283-2469 bp Feature: gene Location: 3005-8464 bp Feature: domain Description: N6_Mtase Location: 5012-5603 bp Feature: domain Description: N6_Mtase Location: 501 2-5603 bp Feature: domain Description: COG4646 Location: 6194-8306 bp Feature: domain Description: COG4646 Location: 61 94-8306 bp Feature: gene Location: 8515-9066 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT N6_Mtase (pfam02384), COG4646 (Adenine-specific DNA methylase, N12 class ), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), SF2_C_SNF (cd18793)

Seq: JABCRQ010000066.1 Streptococcus suis strain HNBY57 NODE_66_length_6387_cov_161.362, whole genome shotgun sequence (6387 bp)
Overview 1 RT 1: 154-5155 bp Neighborhood of RT #1 [154, 5199] PRK07726 RVT-GII HNHc PRK07726 SR_ResInv HTH_23 Feature: gene Location: 154-324 bp Feature: gene Location: 812-1312 bp Feature: domain Description: PRK07726 Location: 815-1295 bp Feature: domain Description: PRK0772 6 Location: 815-12 95 bp Feature: gene Location: 1555-3441 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1870-2608 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1870-2 608 bp Feature: domain Description: HNHc Note: nucleases Location: 3157-3325 bp Feature: domain Description: HNHc Note: nucleases Location: 3157-332 5 bp Feature: gene Location: 4178-4540 bp Feature: domain Description: PRK07726 Location: 4187-4520 bp Feature: domain Description: PRK0772 6 Location: 4187-452 0 bp Feature: gene Location: 4540-5199 bp Feature: domain Description: SR_ResInv Location: 4591-4978 bp Feature: domain Description: SR_ResInv Location: 4591-4978 bp Feature: domain Description: HTH_23 Location: 5059-5155 bp Feature: domain Description: HTH_2 3 Location: 5059-5155 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507), PRK07726 (DNA topoisomerase 3), SR_ResInv (cd03768), HTH_23 (pfam13384)

Seq: JABCRQ010000078.1 Streptococcus suis strain HNBY57 NODE_78_length_2653_cov_261.313, whole genome shotgun sequence (2653 bp)
Overview 1 RT 1: 371-2651 bp Neighborhood of RT #1 [371, 2651] RVT_N RVT-GII GIIM Feature: gene Location: 371-2242 bp Feature: RT Description: RVT_N Location: 629-872 bp Feature: RT Description: RVT_N Location: 629-872 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 917-1565 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 917-1565 bp Feature: domain Description: GIIM Note: maturase Location: 1622-1850 bp Feature: domain Description: GIIM Note: maturase Location: 1622-1850 bp Feature: gene Location: 2376-2651 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)