myRT

myRT report for GCA_013030595.1_ASM1303059v1

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Seq: JABBFK010000113.1 Escherichia coli strain C113 Sample_C113_R1_contig_118_consensus, whole genome shotgun sequence (3386 bp)
Overview 1 RT 1: 70-3059 bp Neighborhood of RT #1 [70, 3079] DUF4094 Peptidase_S74 RVT-UG17 SLATT_5 Feature: gene Location: 70-774 bp Feature: domain Description: DUF4094 Location: 112-202 bp Feature: domain Description: DUF4094 Location: 1 1 2-202 bp Feature: domain Description: Peptidase_S74 Location: 418-577 bp Feature: domain Description: Peptidase_S74 Location: 41 8-577 bp Feature: gene Location: 785-1072 bp Feature: gene Location: 1180-2550 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 1408-2014 bp Feature: RT Description: RVT-UG1 7 Note: UG1 7 RT Location: 1 408-201 4 bp Feature: gene Location: 2537-3079 bp Feature: domain Description: SLATT_5 Location: 2543-3059 bp Feature: domain Description: SLATT_5 Location: 2543-3059 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4094 (pfam13334), Peptidase_S74 (pfam13884), RVT-UG17, SLATT_5 (pfam18160)

Seq: JABBFK010000012.1 Escherichia coli strain C113 Sample_C113_R1_contig_12_consensus, whole genome shotgun sequence (227859 bp)
Overview 1 RT 1: 177411-181352 bp Neighborhood of RT #1 [177411, 181352] RVT-Retrons Feature: gene Location: 177411-178550 bp Feature: gene Location: 178596-178763 bp Feature: gene Location: 178785-180557 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 178944-179562 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 178944-179562 bp Feature: gene Location: 180778-180921 bp Feature: gene Location: 181113-181352 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons

Seq: JABBFK010000241.1 Escherichia coli strain C113 Sample_C113_R1_contig_283_consensus, whole genome shotgun sequence (298 bp)
Overview 1 RT 1: 2-296 bp Neighborhood of RT #1 [2, 295] RVT-GII Feature: gene Location: 2-295 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11-296 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11-296 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII