myRT

myRT report for GCA_013030725.1_ASM1303072v1

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Seq: JABBGY010000026.1 Escherichia coli strain B120 Sample_120_R1_contig_26_consensus, whole genome shotgun sequence (76987 bp)
Overview 1 RT 1: 3-4008 bp Neighborhood of RT #1 [3, 4049] rve RVT-GII GIIM LZ_Tnp_IS66 zf-IS66 DDE_Tnp_IS66 Feature: gene Location: 3-578 bp Feature: domain Description: rve Location: 21-387 bp Feature: domain Description: rve Location: 21 -387 bp Feature: gene Location: 723-890 bp Feature: gene Location: 916-2148 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1117-1771 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 1 7-1 771 bp Feature: domain Description: GIIM Note: maturase Location: 1849-2071 bp Feature: domain Description: GIIM Note: maturase Location: 1 849-2071 bp Feature: gene Location: 2143-2562 bp Feature: gene Location: 2610-4049 bp Feature: domain Description: LZ_Tnp_IS66 Location: 2748-2973 bp Feature: domain Description: LZ_Tnp_IS66 Location: 2748-2973 bp Feature: domain Description: zf-IS66 Location: 2994-3126 bp Feature: domain Description: zf-IS66 Location: 2994-31 26 bp Feature: domain Description: DDE_Tnp_IS66 Location: 3171-4008 bp Feature: domain Description: DDE_Tnp_IS66 Location: 31 71 -4008 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT LZ_Tnp_IS66 (pfam13007), zf-IS66 (pfam13005), DDE_Tnp_IS66 (pfam03050), rve (pfam00665), RVT-GII, GIIM (pfam08388)

Seq: JABBGY010000309.1 Escherichia coli strain B120 Sample_120_R1_contig_344_consensus, whole genome shotgun sequence (1064 bp)
Overview 1 RT 1: 1-868 bp Neighborhood of RT #1 [1, 1062] RVT-GII Feature: gene Location: 1-1062 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 37-868 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 37-868 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: JABBGY010000531.1 Escherichia coli strain B120 Sample_120_R1_contig_626_consensus, whole genome shotgun sequence (454 bp)
Overview 1 RT 1: 1-454 bp Neighborhood of RT #1 [1, 453] RVT-GII Feature: gene Location: 1-453 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 22-454 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 22-454 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: JABBGY010000731.1 Escherichia coli strain B120 Sample_120_R1_contig_898_consensus, whole genome shotgun sequence (297 bp)
Overview 1 RT 1: 1-220 bp Neighborhood of RT #1 [1, 294] RVT-GII Feature: gene Location: 1-294 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 22-220 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 22-220 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII