myRT

myRT report for GCA_013032455.1_ASM1303245v1

Download annotations/find similar RTs

Seq: WQCF01000001.1 Ruegeria atlantica strain HKCCD6218 NODE_1, whole genome shotgun sequence (828921 bp)
Overview 1 RT 1: 162781-169111 bp Neighborhood of RT #1 [162781, 169111] Phage_integrase RVT-UG13 INT_ICEBs1_C_like Feature: gene Location: 162781-163080 bp Feature: gene Location: 163230-163802 bp Feature: domain Description: Phage_integrase Location: 163248-163767 bp Feature: domain Description: Phage_integrase Location: 1 63248-1 63767 bp Feature: gene Location: 163915-165732 bp Feature: RT Description: RVT-UG13 Note: UG13 RT Location: 164323-164794 bp Feature: RT Description: RVT-UG1 3 Note: UG1 3 RT Location: 1 64323-1 64794 bp Feature: gene Location: 166490-167983 bp Feature: domain Description: INT_ICEBs1_C_like Location: 167285-167804 bp Feature: domain Description: INT_ICEBs1 _C_like Location: 1 67285-1 67804 bp Feature: gene Location: 168002-169111 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Phage_integrase (pfam00589), RVT-UG13, INT_ICEBs1_C_like (cd01189)

Seq: WQCF01000002.1 Ruegeria atlantica strain HKCCD6218 NODE_2, whole genome shotgun sequence (576763 bp)
Overview 1 RT 1: 522443-528671 bp Neighborhood of RT #1 [522443, 528671] AlpA RVT-UG17 Feature: gene Location: 522443-523069 bp Feature: gene Location: 523337-523519 bp Feature: domain Description: AlpA Location: 523349-523511 bp Feature: domain Description: AlpA Location: 52 3349-52 3511 bp Feature: gene Location: 523586-524959 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 524087-524591 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 52 4087-52 4591 bp Feature: gene Location: 525461-527794 bp Feature: gene Location: 527970-528671 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AlpA (COG3311), RVT-UG17