myRT

myRT report for GCA_013044195.1_ASM1304419v1

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Seq: JABEUV010000148.1 (23107 bp)
Overview 1 RT 1: 6624-13649 bp Neighborhood of RT #1 [6624, 13669] SpoU-like_TrmL AAA_32 AAA_32 spore_lonB RVT-GII GIIM OmpA DUF2203 Feature: gene Location: 6624-7088 bp Feature: domain Description: SpoU-like_TrmL Location: 6633-7062 bp Feature: domain Description: SpoU-like_TrmL Location: 6633-7062 bp Feature: gene Location: 7168-10629 bp Feature: domain Description: AAA_32 Location: 7942-8674 bp Feature: domain Description: AAA_32 Location: 7942-8674 bp Feature: domain Description: AAA_32 Location: 8896-9904 bp Feature: domain Description: AAA_32 Location: 8896-9904 bp Feature: domain Description: spore_lonB Location: 9973-10441 bp Feature: domain Description: spore_lonB Location: 9973-1 0441 bp Feature: gene Location: 11118-12494 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11430-12048 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 430-1 2048 bp Feature: domain Description: GIIM Note: maturase Location: 12099-12306 bp Feature: domain Description: GIIM Note: maturase Location: 1 2099-1 2306 bp Feature: gene Location: 12578-13105 bp Feature: domain Description: OmpA Location: 12677-13082 bp Feature: domain Description: OmpA Location: 1 2677-1 3082 bp Feature: gene Location: 13274-13669 bp Feature: domain Description: DUF2203 Location: 13280-13649 bp Feature: domain Description: DUF2203 Location: 1 3280-1 3649 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SpoU-like_TrmL (cd18094), AAA_32 (pfam13654), spore_lonB (TIGR02902), RVT-GII, GIIM (pfam08388), OmpA (pfam00691), DUF2203 (pfam09969)

Seq: JABEUV010000291.1 (17506 bp)
Overview 1 RT 1: 15426-17437 bp Neighborhood of RT #1 [15426, 17505] YafJ RVT-UNC Feature: gene Location: 15426-16280 bp Feature: domain Description: YafJ Location: 15429-16185 bp Feature: domain Description: YafJ Location: 1542 9-16185 bp Feature: gene Location: 16421-17269 bp Feature: gene Location: 17251-17505 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 17257-17437 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 172 57-17437 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YafJ (COG0121), RVT-UG21/RVT-UG7/RVT-CRISPR/RVT-UG18(RVT-UNC)

Seq: JABEUV010000292.1 (12368 bp)
Overview 1 RT 1: 9765-12344 bp Neighborhood of RT #1 [9765, 12367] SixA COG1373 RVT-UNC Feature: gene Location: 9765-10238 bp Feature: domain Description: SixA Location: 9768-10209 bp Feature: domain Description: SixA Location: 9768-10209 bp Feature: gene Location: 10279-11490 bp Feature: domain Description: COG1373 Location: 10288-11326 bp Feature: domain Description: COG13 73 Location: 10288-113 26 bp Feature: gene Location: 12158-12367 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 12164-12344 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 12164-123 44 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SixA (COG2062), COG1373 (Predicted ATPase, AAA+ superfamily ), RVT-UG23/RVT-UG21/RVT-UG7/RVT-UG9(RVT-UNC)