myRT

myRT report for GCA_013048485.1_ASM1304848v1

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Seq: VHSP01000004.1 (251633 bp)
Overview 1 RT 1: 150762-157000 bp Neighborhood of RT #1 [150762, 157011] EFP_modif_epmB DUF2188 RVT_N RVT-GII GIIM HNHc groEL Feature: gene Location: 150762-151784 bp Feature: domain Description: EFP_modif_epmB Location: 150810-151767 bp Feature: domain Description: EFP_modif_epmB Location: 1 5081 0-1 51 767 bp Feature: gene Location: 152173-152394 bp Feature: domain Description: DUF2188 Location: 152188-152365 bp Feature: domain Description: DUF21 88 Location: 1 521 88-1 52365 bp Feature: gene Location: 152580-154265 bp Feature: domain Description: RVT_N Location: 152637-152880 bp Feature: domain Description: RVT_N Location: 1 52637-1 52880 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 152925-153570 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 52925-1 53570 bp Feature: domain Description: GIIM Note: maturase Location: 153621-153855 bp Feature: domain Description: GIIM Note: maturase Location: 1 53621 -1 53855 bp Feature: domain Description: HNHc Note: nucleases Location: 154071-154233 bp Feature: domain Description: HNHc Note: nucleases Location: 1 54071 -1 54233 bp Feature: gene Location: 154439-154711 bp Feature: gene Location: 155374-157011 bp Feature: domain Description: groEL Location: 155380-157000 bp Feature: domain Description: groEL Location: 1 55380-1 57000 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: VHSP01000016.1 (3644 bp)
Overview 1 RT 1: 667-3229 bp Neighborhood of RT #1 [667, 3229] ParD_antitoxin ParE RVT-Retrons Feature: gene Location: 667-918 bp Feature: domain Description: ParD_antitoxin Location: 679-910 bp Feature: domain Description: ParD_antitoxin Location: 679-910 bp Feature: gene Location: 915-1214 bp Feature: domain Description: ParE Location: 918-1200 bp Feature: domain Description: ParE Location: 918-12 00 bp Feature: gene Location: 1338-2234 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1404-1998 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1404-1998 bp Feature: gene Location: 2267-3229 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: VHSP01000002.1 (834663 bp)
Overview 1 RT 1: 456583-460213 bp Neighborhood of RT #1 [456583, 460221] HTH_XRE RVT-Retrons MgsA YqdH Feature: gene Location: 456583-456930 bp Feature: gene Location: 456970-457275 bp Feature: domain Description: HTH_XRE Location: 456985-457147 bp Feature: domain Description: HTH_XRE Location: 456985-457147 bp Feature: gene Location: 457256-458215 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 457430-457985 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 45743 0-457985 bp Feature: gene Location: 458440-458895 bp Feature: domain Description: MgsA Location: 458464-458881 bp Feature: domain Description: MgsA Location: 458464-458881 bp Feature: gene Location: 459073-460221 bp Feature: domain Description: YqdH Location: 459079-460213 bp Feature: domain Description: YqdH Location: 459079-460213 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: VHSP01000001.1 (1757469 bp)
Overview 1 RT 1: 1394231-1397887 bp 2 RT 2: 1618708-1626616 bp Neighborhood of RT #1 [1394231, 1397887] FlgN RVT-Retrons Neighborhood of RT #2 [1618708, 1626627] DnaG PRK05658 RVT-Retrons AraC GyrI-like Feature: gene Location: 1394231-1394668 bp Feature: domain Description: FlgN Location: 1394255-1394600 bp Feature: domain Description: FlgN Location: 1394 255-1394 600 bp Feature: gene Location: 1395164-1395292 bp Feature: gene Location: 1395416-1396447 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1395647-1396190 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 139564 7-1396190 bp Feature: gene Location: 1396692-1397036 bp Feature: gene Location: 1397036-1397887 bp Feature: gene Location: 1618708-1620462 bp Feature: domain Description: DnaG Location: 1618723-1620442 bp Feature: domain Description: DnaG Location: 1618723-16204 4 2 bp Feature: gene Location: 1620560-1622428 bp Feature: domain Description: PRK05658 Location: 1620566-1622426 bp Feature: domain Description: PRK05658 Location: 1620566-16224 26 bp Feature: gene Location: 1623100-1624050 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1623205-1623796 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1623205-1623796 bp Feature: gene Location: 1624047-1625018 bp Feature: gene Location: 1625722-1626627 bp Feature: domain Description: AraC Location: 1625782-1626088 bp Feature: domain Description: AraC Location: 1625782-1626088 bp Feature: domain Description: GyrI-like Location: 1626175-1626616 bp Feature: domain Description: GyrI-like Location: 1626175-1626616 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT