myRT

myRT report for GCA_013072695.1_ASM1307269v1

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Seq: LXUK01000004.1 Acinetobacter sp. Ac_5812 contig_12, whole genome shotgun sequence (37225 bp)
Overview 1 RT 1: 13280-16140 bp Neighborhood of RT #1 [13280, 16262] DDE_3 PHA02517 RVT-GII GIIM HTH_21 Feature: gene Location: 13280-13687 bp Feature: domain Description: DDE_3 Location: 13310-13646 bp Feature: domain Description: DDE_3 Location: 1 331 0-1 3646 bp Feature: gene Location: 13715-14167 bp Feature: domain Description: PHA02517 Location: 13724-14132 bp Feature: domain Description: PHA0251 7 Location: 1 3724-1 41 32 bp Feature: gene Location: 14256-15497 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14454-15111 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 4454-1 51 1 1 bp Feature: domain Description: GIIM Note: maturase Location: 15189-15420 bp Feature: domain Description: GIIM Note: maturase Location: 1 51 89-1 5420 bp Feature: gene Location: 15504-15668 bp Feature: gene Location: 15990-16262 bp Feature: domain Description: HTH_21 Location: 15993-16140 bp Feature: domain Description: HTH_21 Location: 1 5993-1 61 40 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_3 (pfam13358), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), HTH_21 (pfam13276)

Seq: LXUK01000026.1 Acinetobacter sp. Ac_5812 contig_7, whole genome shotgun sequence (83663 bp)
Overview 1 RT 1: 3-3455 bp Neighborhood of RT #1 [3, 3487] RVT_N RVT-GII LZ_Tnp_IS66 zf-IS66 DDE_Tnp_IS66 TnpB_IS66 Feature: gene Location: 3-1091 bp Feature: RT Description: RVT_N Location: 63-306 bp Feature: RT Description: RVT_N Location: 63-306 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 351-987 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 351-987 bp Feature: gene Location: 1632-3077 bp Feature: domain Description: LZ_Tnp_IS66 Location: 1845-2061 bp Feature: domain Description: LZ_Tnp_IS66 Location: 1845-2 061 bp Feature: domain Description: zf-IS66 Location: 2094-2220 bp Feature: domain Description: zf-IS66 Location: 2 094-2 2 2 0 bp Feature: domain Description: DDE_Tnp_IS66 Location: 2262-3057 bp Feature: domain Description: DDE_Tnp_IS66 Location: 2 2 62 -3057 bp Feature: gene Location: 3152-3487 bp Feature: domain Description: TnpB_IS66 Location: 3170-3455 bp Feature: domain Description: TnpB_IS66 Location: 3170-3455 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT LZ_Tnp_IS66 (pfam13007), zf-IS66 (pfam13005), DDE_Tnp_IS66 (pfam03050), RVT_N (pfam13655), RVT-GII