myRT

myRT report for GCA_013073245.1_ASM1307324v1

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Seq: JABEZE010000045.1 Escherichia coli strain GZB8C45M GZB8C45M_contig_14_length_126644_cov_17.183635, whole genome shotgun sequence (126644 bp)
Overview 1 RT 1: 111589-118514 bp Neighborhood of RT #1 [111589, 119404] Q RVT-Retrons RVT-AbiP2 Phage_GPA Feature: gene Location: 111589-112608 bp Feature: domain Description: Q Location: 111592-112603 bp Feature: domain Description: Q Location: 1 1 1 592-1 1 2603 bp Feature: gene Location: 112651-113358 bp Feature: gene Location: 113355-114545 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 113505-114087 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 1 3505-1 1 4087 bp Feature: gene Location: 115096-116640 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 115513-115966 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 1 1 551 3-1 1 5966 bp Feature: gene Location: 116806-117066 bp Feature: gene Location: 117128-119404 bp Feature: domain Description: Phage_GPA Location: 117527-118514 bp Feature: domain Description: Phage_GPA Location: 1 1 7527-1 1 851 4 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Q (PHA02536), RVT-Retrons, RVT-AbiP2, Phage_GPA (pfam05840)

Seq: JABEZE010000120.1 Escherichia coli strain GZB8C45M GZB8C45M_contig_47_length_26770_cov_17.477086, whole genome shotgun sequence (26770 bp)
Overview 1 RT 1: 23410-25899 bp Neighborhood of RT #1 [23410, 25964] RVT-GII Inovirus_Gp2 Feature: gene Location: 23410-23583 bp Feature: gene Location: 23617-23925 bp Feature: gene Location: 23912-25075 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 24026-24713 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 402 6-2 4713 bp Feature: gene Location: 25401-25964 bp Feature: domain Description: Inovirus_Gp2 Location: 25458-25899 bp Feature: domain Description: Inovirus_Gp2 Location: 2 5458-2 5899 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Inovirus_Gp2 (pfam11726)

Seq: JABEZE010000145.1 Escherichia coli strain GZB8C45M GZB8C45M_contig_57_length_17334_cov_11.669727, whole genome shotgun sequence (17612 bp)
Overview 1 RT 1: 1599-4676 bp Neighborhood of RT #1 [1599, 4741] RVT-GII GIIM PHA02517 Feature: gene Location: 1599-1742 bp Feature: gene Location: 1767-1952 bp Feature: gene Location: 2039-3562 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2312-3044 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23 12-3 044 bp Feature: domain Description: GIIM Note: maturase Location: 3119-3317 bp Feature: domain Description: GIIM Note: maturase Location: 3 119-3 3 17 bp Feature: gene Location: 3516-3941 bp Feature: gene Location: 4154-4741 bp Feature: domain Description: PHA02517 Location: 4340-4676 bp Feature: domain Description: PHA02517 Location: 43 40-4676 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed)

Seq: JABEZE010000166.1 Escherichia coli strain GZB8C45M GZB8C45M_contig_76_length_6799_cov_10.401829, whole genome shotgun sequence (6799 bp)
Overview 1 RT 1: 669-5210 bp Neighborhood of RT #1 [669, 5212] RVT-GII GIIM RAYT PRK11447 Feature: gene Location: 669-812 bp Feature: gene Location: 1176-1373 bp Feature: gene Location: 1404-2750 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1692-2310 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1692-2310 bp Feature: domain Description: GIIM Note: maturase Location: 2358-2589 bp Feature: domain Description: GIIM Note: maturase Location: 2358-2589 bp Feature: gene Location: 2905-3444 bp Feature: domain Description: RAYT Location: 2983-3346 bp Feature: domain Description: RAYT Location: 2983-334 6 bp Feature: gene Location: 3791-5212 bp Feature: domain Description: PRK11447 Location: 3794-5210 bp Feature: domain Description: PRK114 4 7 Location: 3794 -5210 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), RAYT (COG1943), PRK11447 (cellulose synthase subunit BcsC; Provisional)