myRT

myRT report for GCA_013073585.1_ASM1307358v1

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Seq: WEQH01000022.1 Escherichia coli strain E10V5A E10V5A_merged_22, whole genome shotgun sequence (86387 bp)
Overview 1 RT 1: 16875-22358 bp Neighborhood of RT #1 [16875, 22363] lnt PRK09413 RVT-GII GIIM PinE Feature: gene Location: 16875-18086 bp Feature: domain Description: lnt Location: 17241-17904 bp Feature: domain Description: lnt Location: 1 7241 -1 7904 bp Feature: gene Location: 18980-19177 bp Feature: domain Description: PRK09413 Location: 18983-19145 bp Feature: domain Description: PRK0941 3 Location: 1 8983-1 91 45 bp Feature: gene Location: 19653-21005 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19974-20592 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 9974-20592 bp Feature: domain Description: GIIM Note: maturase Location: 20640-20871 bp Feature: domain Description: GIIM Note: maturase Location: 20640-20871 bp Feature: gene Location: 21215-21616 bp Feature: gene Location: 21716-22363 bp Feature: domain Description: PinE Location: 21809-22358 bp Feature: domain Description: PinE Location: 21 809-22358 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT lnt (TIGR00546), PRK09413 (IS2 repressor TnpA; Reviewed), RVT-GII, GIIM (pfam08388), PinE (COG1961)

Seq: WEQH01000051.1 Escherichia coli strain E10V5A E10V5A_merged_51, whole genome shotgun sequence (3319 bp)
Overview 1 RT 1: 2-3317 bp Neighborhood of RT #1 [2, 3316] PHA02517 RVT-GII GIIM PHA02517 Feature: gene Location: 2-205 bp Feature: gene Location: 312-791 bp Feature: domain Description: PHA02517 Location: 372-726 bp Feature: domain Description: PHA02 517 Location: 372 -72 6 bp Feature: gene Location: 1383-2906 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1656-2388 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1656-2 388 bp Feature: domain Description: GIIM Note: maturase Location: 2463-2661 bp Feature: domain Description: GIIM Note: maturase Location: 2 463-2 661 bp Feature: gene Location: 3083-3316 bp Feature: domain Description: PHA02517 Location: 3086-3317 bp Feature: domain Description: PHA02 517 Location: 3086-3317 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed)

Seq: WEQH01000009.1 Escherichia coli strain E10V5A E10V5A_merged_9, whole genome shotgun sequence (195366 bp)
Overview 1 RT 1: 157847-161726 bp Neighborhood of RT #1 [157847, 161731] dut slmA RVT-Retrons pyrE rph Feature: gene Location: 157847-158305 bp Feature: domain Description: dut Location: 157853-158300 bp Feature: domain Description: dut Location: 157853 -1583 00 bp Feature: gene Location: 158412-159008 bp Feature: domain Description: slmA Location: 158418-158994 bp Feature: domain Description: slmA Location: 158418-158994 bp Feature: gene Location: 159052-160011 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 159187-159736 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 159187-15973 6 bp Feature: gene Location: 160308-160964 bp Feature: domain Description: pyrE Location: 160326-160959 bp Feature: domain Description: pyrE Location: 1603 26-160959 bp Feature: gene Location: 161015-161731 bp Feature: domain Description: rph Location: 161018-161726 bp Feature: domain Description: rph Location: 161018-161726 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT dut (TIGR00576), slmA (PRK09480), RVT-Retrons, pyrE (TIGR00336), rph (PRK00173)