myRT

myRT report for GCA_013073695.1_ASM1307369v1

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Seq: WEQD01000004.1 Escherichia coli strain E3V1B E3V1B_merged_4, whole genome shotgun sequence (306566 bp)
Overview 1 RT 1: 165537-169892 bp Neighborhood of RT #1 [165537, 169915] HTH_XRE RVT-Retrons PRK13889 TraD Feature: gene Location: 165537-165752 bp Feature: gene Location: 165843-166124 bp Feature: domain Description: HTH_XRE Location: 165858-166023 bp Feature: domain Description: HTH_XRE Location: 1 65858-1 66023 bp Feature: gene Location: 166117-167217 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 166258-166810 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 66258-1 6681 0 bp Feature: gene Location: 167294-168796 bp Feature: domain Description: PRK13889 Location: 167297-167876 bp Feature: domain Description: PRK1 3889 Location: 1 67297-1 67876 bp Feature: gene Location: 169604-169915 bp Feature: domain Description: TraD Location: 169718-169892 bp Feature: domain Description: TraD Location: 1 6971 8-1 69892 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_XRE (smart00530), RVT-Retrons, PRK13889 (conjugal transfer relaxase TraA; Provisional), TraD (pfam06412)

Seq: WEQD01000088.1 Escherichia coli strain E3V1B E3V1B_merged_88, whole genome shotgun sequence (2271 bp)
Overview 1 RT 1: 1-1935 bp Neighborhood of RT #1 [1, 2180] RVT-GII GIIM Feature: gene Location: 1-363 bp Feature: gene Location: 657-2180 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 930-1662 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 930-1662 bp Feature: domain Description: GIIM Note: maturase Location: 1737-1935 bp Feature: domain Description: GIIM Note: maturase Location: 1737-1935 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)