myRT

myRT report for GCA_013073705.1_ASM1307370v1

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Seq: WEQC01000112.1 Escherichia coli strain E3V1A E3V1A_merged_112, whole genome shotgun sequence (2271 bp)
Overview 1 RT 1: 1-1935 bp Neighborhood of RT #1 [1, 2180] RVT-GII GIIM Feature: gene Location: 1-363 bp Feature: gene Location: 657-2180 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 930-1662 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 930-1 662 bp Feature: domain Description: GIIM Note: maturase Location: 1737-1935 bp Feature: domain Description: GIIM Note: maturase Location: 1 737-1 935 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: WEQC01000037.1 Escherichia coli strain E3V1A E3V1A_merged_37, whole genome shotgun sequence (39766 bp)
Overview 1 RT 1: 176-2201 bp Neighborhood of RT #1 [176, 2201] YhhI RVT-GII GIIM Feature: gene Location: 176-436 bp Feature: domain Description: YhhI Location: 251-422 bp Feature: domain Description: YhhI Location: 2 51-42 2 bp Feature: gene Location: 447-1697 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 651-1308 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 651-1308 bp Feature: domain Description: GIIM Note: maturase Location: 1389-1611 bp Feature: domain Description: GIIM Note: maturase Location: 1389-1611 bp Feature: gene Location: 1721-2008 bp Feature: gene Location: 2061-2201 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YhhI (COG5433), RVT-GII, GIIM (pfam08388)

Seq: WEQC01000005.1 Escherichia coli strain E3V1A E3V1A_merged_5, whole genome shotgun sequence (179639 bp)
Overview 1 RT 1: 176692-179636 bp Neighborhood of RT #1 [176692, 179636] SLATT_5 RVT-UG17 Feature: gene Location: 176692-176868 bp Feature: gene Location: 177276-177980 bp Feature: domain Description: SLATT_5 Location: 177438-177948 bp Feature: domain Description: SLATT_5 Location: 17743 8-177948 bp Feature: gene Location: 177958-179328 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 178186-178792 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 178186-178792 bp Feature: gene Location: 179409-179636 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SLATT_5 (pfam18160), RVT-UG17