myRT

myRT report for GCA_013073745.1_ASM1307374v1

Download annotations/find similar RTs

Seq: WEQA01000051.1 Escherichia coli strain P677V1 677-1_merged_51, whole genome shotgun sequence (26129 bp)
Overview 1 RT 1: 602-3917 bp Neighborhood of RT #1 [602, 3955] PHA02517 RVT-GII GIIM PHA02517 INT_P4_C Feature: gene Location: 602-730 bp Feature: gene Location: 778-1059 bp Feature: domain Description: PHA02517 Location: 784-994 bp Feature: domain Description: PHA0251 7 Location: 784-994 bp Feature: gene Location: 1651-3174 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1924-2656 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 924-2656 bp Feature: domain Description: GIIM Note: maturase Location: 2731-2929 bp Feature: domain Description: GIIM Note: maturase Location: 2731 -2929 bp Feature: gene Location: 3351-3737 bp Feature: domain Description: PHA02517 Location: 3354-3735 bp Feature: domain Description: PHA0251 7 Location: 3354-3735 bp Feature: gene Location: 3740-3955 bp Feature: domain Description: INT_P4_C Location: 3752-3917 bp Feature: domain Description: INT_P4_C Location: 3752-391 7 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed), INT_P4_C (cd00801)

Seq: WEQA01000062.1 Escherichia coli strain P677V1 677-1_merged_62, whole genome shotgun sequence (15050 bp)
Overview 1 RT 1: 2-2035 bp Neighborhood of RT #1 [2, 2035] DDE_Tnp_IS66 DDE_Tnp_IS66_C RVT-GII group_II_RT_mat Feature: gene Location: 2-772 bp Feature: domain Description: DDE_Tnp_IS66 Location: 5-584 bp Feature: domain Description: DDE_Tnp_IS66 Location: 5-584 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 638-749 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 638-749 bp Feature: gene Location: 806-1498 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 824-1436 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 82 4-1436 bp Feature: gene Location: 1547-1765 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 1664-1757 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 1664-1757 bp Feature: gene Location: 1823-2035 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT group_II_RT_mat (TIGR04416), DDE_Tnp_IS66 (pfam03050), DDE_Tnp_IS66_C (pfam13817), RVT-GII