myRT

myRT report for GCA_013073785.1_ASM1307378v1

Download annotations/find similar RTs

Seq: WEPY01000031.1 Escherichia coli strain P415V1 415-1_merged_31, whole genome shotgun sequence (43620 bp)
Overview 1 RT 1: 21381-24731 bp Neighborhood of RT #1 [21381, 24763] PinE RVT-GII GIIM PRK09413 Feature: gene Location: 21381-22028 bp Feature: domain Description: PinE Location: 21474-22023 bp Feature: domain Description: PinE Location: 21 474-22023 bp Feature: gene Location: 22128-22529 bp Feature: gene Location: 22738-24090 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23059-23677 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23059-23677 bp Feature: domain Description: GIIM Note: maturase Location: 23725-23956 bp Feature: domain Description: GIIM Note: maturase Location: 23725-23956 bp Feature: gene Location: 24161-24511 bp Feature: gene Location: 24566-24763 bp Feature: domain Description: PRK09413 Location: 24569-24731 bp Feature: domain Description: PRK0941 3 Location: 24569-24731 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PinE (COG1961), RVT-GII, GIIM (pfam08388), PRK09413 (IS2 repressor TnpA; Reviewed)

Seq: WEPY01000086.1 Escherichia coli strain P415V1 415-1_merged_86, whole genome shotgun sequence (2272 bp)
Overview 1 RT 1: 93-2269 bp Neighborhood of RT #1 [93, 2269] RVT-GII GIIM Feature: gene Location: 93-1616 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 366-1098 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 366-1098 bp Feature: domain Description: GIIM Note: maturase Location: 1173-1371 bp Feature: domain Description: GIIM Note: maturase Location: 1173-1371 bp Feature: gene Location: 1910-2269 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)