myRT

myRT report for GCA_013073795.1_ASM1307379v1

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Seq: WEPW01000051.1 Escherichia coli strain P109V1 109-1_merged_51, whole genome shotgun sequence (26077 bp)
Overview 1 RT 1: 550-3865 bp Neighborhood of RT #1 [550, 3903] PHA02517 RVT-GII GIIM PHA02517 INT_P4_C Feature: gene Location: 550-678 bp Feature: gene Location: 726-1007 bp Feature: domain Description: PHA02517 Location: 732-942 bp Feature: domain Description: PHA0251 7 Location: 732-942 bp Feature: gene Location: 1599-3122 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1872-2604 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 872-2604 bp Feature: domain Description: GIIM Note: maturase Location: 2679-2877 bp Feature: domain Description: GIIM Note: maturase Location: 2679-2877 bp Feature: gene Location: 3299-3685 bp Feature: domain Description: PHA02517 Location: 3302-3683 bp Feature: domain Description: PHA0251 7 Location: 3302-3683 bp Feature: gene Location: 3688-3903 bp Feature: domain Description: INT_P4_C Location: 3700-3865 bp Feature: domain Description: INT_P4_C Location: 3700-3865 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed), INT_P4_C (cd00801)

Seq: WEPW01000065.1 Escherichia coli strain P109V1 109-1_merged_65, whole genome shotgun sequence (14339 bp)
Overview 1 RT 1: 95-1324 bp Neighborhood of RT #1 [95, 1324] RVT-GII group_II_RT_mat Feature: gene Location: 95-787 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 113-725 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 113-72 5 bp Feature: gene Location: 836-1054 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 953-1046 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 953-1046 bp Feature: gene Location: 1112-1324 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT group_II_RT_mat (TIGR04416), RVT-GII