myRT

myRT report for GCA_013073845.1_ASM1307384v1

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Seq: WERE01000031.1 Escherichia coli strain K24V1 K221_merged_31, whole genome shotgun sequence (40789 bp)
Overview 1 RT 1: 18215-21565 bp Neighborhood of RT #1 [18215, 21597] PinE RVT-GII GIIM PRK09413 Feature: gene Location: 18215-18862 bp Feature: domain Description: PinE Location: 18308-18857 bp Feature: domain Description: PinE Location: 1 8308-1 8857 bp Feature: gene Location: 18962-19363 bp Feature: gene Location: 19572-20924 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19893-20511 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 9893-2051 1 bp Feature: domain Description: GIIM Note: maturase Location: 20559-20790 bp Feature: domain Description: GIIM Note: maturase Location: 20559-20790 bp Feature: gene Location: 20995-21345 bp Feature: gene Location: 21400-21597 bp Feature: domain Description: PRK09413 Location: 21403-21565 bp Feature: domain Description: PRK0941 3 Location: 21 403-21 565 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PinE (COG1961), RVT-GII, GIIM (pfam08388), PRK09413 (IS2 repressor TnpA; Reviewed)

Seq: WERE01000058.1 Escherichia coli strain K24V1 K221_merged_58, whole genome shotgun sequence (2897 bp)
Overview 1 RT 1: 190-2671 bp Neighborhood of RT #1 [190, 2730] RVT-GII GIIM PHA02517 Feature: gene Location: 190-1713 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 463-1195 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 463-1195 bp Feature: domain Description: GIIM Note: maturase Location: 1270-1468 bp Feature: domain Description: GIIM Note: maturase Location: 12 70-1468 bp Feature: gene Location: 2305-2730 bp Feature: domain Description: PHA02517 Location: 2329-2671 bp Feature: domain Description: PHA02 517 Location: 2 32 9-2 671 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed)