myRT

myRT report for GCA_013073925.1_ASM1307392v1

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Seq: WERA01000034.1 Escherichia coli strain K13V4 K115_merged_34, whole genome shotgun sequence (30957 bp)
Overview 1 RT 1: 12805-15773 bp Neighborhood of RT #1 [12805, 15838] RVT-GII GIIM PHA02517 Feature: gene Location: 12805-12948 bp Feature: gene Location: 12973-13176 bp Feature: gene Location: 13244-14767 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13517-14249 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 351 7-1 4249 bp Feature: domain Description: GIIM Note: maturase Location: 14324-14522 bp Feature: domain Description: GIIM Note: maturase Location: 1 4324-1 4522 bp Feature: gene Location: 14721-15146 bp Feature: gene Location: 15359-15838 bp Feature: domain Description: PHA02517 Location: 15419-15773 bp Feature: domain Description: PHA0251 7 Location: 1 541 9-1 5773 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed)

Seq: WERA01000053.1 Escherichia coli strain K13V4 K115_merged_53, whole genome shotgun sequence (12795 bp)
Overview 1 RT 1: 3118-6468 bp Neighborhood of RT #1 [3118, 6500] PinE RVT-GII GIIM PRK09413 Feature: gene Location: 3118-3765 bp Feature: domain Description: PinE Location: 3211-3760 bp Feature: domain Description: PinE Location: 32 11-3760 bp Feature: gene Location: 3865-4266 bp Feature: gene Location: 4475-5827 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4796-5414 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4796-5414 bp Feature: domain Description: GIIM Note: maturase Location: 5462-5693 bp Feature: domain Description: GIIM Note: maturase Location: 5462 -5693 bp Feature: gene Location: 5898-6248 bp Feature: gene Location: 6303-6500 bp Feature: domain Description: PRK09413 Location: 6306-6468 bp Feature: domain Description: PRK09413 Location: 6306-6468 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PinE (COG1961), RVT-GII, GIIM (pfam08388), PRK09413 (IS2 repressor TnpA; Reviewed)