myRT

myRT report for GCA_013074055.1_ASM1307405v1

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Seq: WEQT01000018.1 Escherichia coli strain E30V1A E30V1A_merged_18, whole genome shotgun sequence (111876 bp)
Overview 1 RT 1: 34707-38259 bp Neighborhood of RT #1 [34707, 38264] PRK09413 RVT-GII GIIM PinE Feature: gene Location: 34707-34871 bp Feature: gene Location: 34882-35079 bp Feature: domain Description: PRK09413 Location: 34885-35047 bp Feature: domain Description: PRK0941 3 Location: 34885-35047 bp Feature: gene Location: 35555-36907 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 35876-36494 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 35876-36494 bp Feature: domain Description: GIIM Note: maturase Location: 36542-36773 bp Feature: domain Description: GIIM Note: maturase Location: 36542-36773 bp Feature: gene Location: 37116-37517 bp Feature: gene Location: 37617-38264 bp Feature: domain Description: PinE Location: 37710-38259 bp Feature: domain Description: PinE Location: 3771 0-38259 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09413 (IS2 repressor TnpA; Reviewed), RVT-GII, GIIM (pfam08388), PinE (COG1961)

Seq: WEQT01000065.1 Escherichia coli strain E30V1A E30V1A_merged_70, whole genome shotgun sequence (2272 bp)
Overview 1 RT 1: 1-1935 bp Neighborhood of RT #1 [1, 2180] RVT-GII GIIM Feature: gene Location: 1-363 bp Feature: gene Location: 657-2180 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 930-1662 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 930-1662 bp Feature: domain Description: GIIM Note: maturase Location: 1737-1935 bp Feature: domain Description: GIIM Note: maturase Location: 1737-1935 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)