myRT

myRT report for GCA_013074285.1_ASM1307428v1

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Seq: WERI01000064.1 Escherichia coli strain K39V1 K391_merged_64, whole genome shotgun sequence (14840 bp)
Overview 1 RT 1: 11623-14724 bp Neighborhood of RT #1 [11623, 14729] PRK09413 RVT-GII GIIM PinE Feature: gene Location: 11623-11820 bp Feature: domain Description: PRK09413 Location: 11626-11788 bp Feature: domain Description: PRK0941 3 Location: 1 1 626-1 1 788 bp Feature: gene Location: 11875-12225 bp Feature: gene Location: 12296-13648 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12617-13235 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 261 7-1 3235 bp Feature: domain Description: GIIM Note: maturase Location: 13283-13514 bp Feature: domain Description: GIIM Note: maturase Location: 1 3283-1 351 4 bp Feature: gene Location: 13857-14258 bp Feature: gene Location: 14358-14729 bp Feature: domain Description: PinE Location: 14364-14724 bp Feature: domain Description: PinE Location: 1 4364-1 4724 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09413 (IS2 repressor TnpA; Reviewed), RVT-GII, GIIM (pfam08388), PinE (COG1961)

Seq: WERI01000090.1 Escherichia coli strain K39V1 K391_merged_90, whole genome shotgun sequence (6715 bp)
Overview 1 RT 1: 2288-6648 bp Neighborhood of RT #1 [2288, 6713] DDE_Tnp_IS66 DDE_Tnp_IS66_C PRK10554 RVT-GII PHA02517 Feature: gene Location: 2288-2635 bp Feature: domain Description: DDE_Tnp_IS66 Location: 2297-2480 bp Feature: domain Description: DDE_Tnp_IS66 Location: 2 2 97-2 480 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 2501-2612 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 2 501-2 612 bp Feature: gene Location: 3019-4116 bp Feature: domain Description: PRK10554 Location: 3067-4114 bp Feature: domain Description: PRK10554 Location: 3067-4114 bp Feature: gene Location: 4554-5885 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4827-5559 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 482 7-5559 bp Feature: gene Location: 5839-6264 bp Feature: gene Location: 6477-6713 bp Feature: domain Description: PHA02517 Location: 6480-6648 bp Feature: domain Description: PHA02 517 Location: 6480-6648 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_IS66 (pfam03050), DDE_Tnp_IS66_C (pfam13817), PRK10554 (outer membrane porin protein C; Provisional), RVT-GII, PHA02517 (putative transposase OrfB; Reviewed)