myRT

myRT report for GCA_013074465.1_ASM1307446v1

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Seq: JABEZH010000117.1 Escherichia coli strain GZB8C37M GZB8C37M_contig_4_length_310195_cov_17.225821, whole genome shotgun sequence (310195 bp)
Overview 1 RT 1: 1440-4910 bp Neighborhood of RT #1 [1440, 5017] Arm-DNA-bind_3 RVT-Retrons PRK09678 Feature: gene Location: 1440-1742 bp Feature: domain Description: Arm-DNA-bind_3 Location: 1449-1701 bp Feature: domain Description: Arm-DNA-bind_3 Location: 1 449-1 701 bp Feature: gene Location: 1926-2171 bp Feature: gene Location: 2197-3129 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2299-2893 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2299-2893 bp Feature: gene Location: 3131-4117 bp Feature: gene Location: 4745-5017 bp Feature: domain Description: PRK09678 Location: 4754-4910 bp Feature: domain Description: PRK09678 Location: 4754-491 0 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Arm-DNA-bind_3 (pfam13356), RVT-Retrons, PRK09678 (DNA-binding transcriptional regulator; Provisional)

Seq: JABEZH010000161.1 Escherichia coli strain GZB8C37M GZB8C37M_contig_8_length_181409_cov_16.503784, whole genome shotgun sequence (181409 bp)
Overview 1 RT 1: 23962-28253 bp Neighborhood of RT #1 [23962, 28253] YesM RVT-GII GIIM RVT-GII Feature: gene Location: 23962-25224 bp Feature: domain Description: YesM Location: 24475-25216 bp Feature: domain Description: YesM Location: 2 4475-2 52 16 bp Feature: gene Location: 25254-25424 bp Feature: gene Location: 25774-26295 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 25780-26062 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 5780-2 6062 bp Feature: domain Description: GIIM Note: maturase Location: 26110-26290 bp Feature: domain Description: GIIM Note: maturase Location: 2 6110-2 62 90 bp Feature: gene Location: 26323-26862 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 26653-26731 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 6653-2 6731 bp Feature: gene Location: 26893-27090 bp Feature: gene Location: 27348-28253 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YesM (COG2972), RVT-GII, GIIM (pfam08388)

Seq: JABEZH010000162.1 Escherichia coli strain GZB8C37M GZB8C37M_contig_90_length_2272_cov_89.935198, whole genome shotgun sequence (2272 bp)
Overview 1 RT 1: 1-1935 bp Neighborhood of RT #1 [1, 2180] RVT-GII GIIM Feature: gene Location: 1-363 bp Feature: gene Location: 657-2180 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 930-1662 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 93 0-1662 bp Feature: domain Description: GIIM Note: maturase Location: 1737-1935 bp Feature: domain Description: GIIM Note: maturase Location: 173 7-193 5 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)