myRT

myRT report for GCA_013111175.1_ASM1311117v1

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Seq: WYCN01000070.1 Vibrio cholerae strain EDC_701 729_Vc_EDC_701_contigs_EDC701_54, whole genome shotgun sequence (31458 bp)
Overview 1 RT 1: 23864-27019 bp Neighborhood of RT #1 [23864, 27019] PRK15285 FimA RVT-UG4 SCPU Feature: gene Location: 23864-24607 bp Feature: domain Description: PRK15285 Location: 23882-24593 bp Feature: domain Description: PRK1 5285 Location: 23882-24593 bp Feature: gene Location: 24618-25193 bp Feature: domain Description: FimA Location: 24687-25191 bp Feature: domain Description: FimA Location: 24687-251 91 bp Feature: gene Location: 25202-25726 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 25220-25559 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 25220-25559 bp Feature: gene Location: 25723-26553 bp Feature: domain Description: SCPU Location: 26239-26419 bp Feature: domain Description: SCPU Location: 26239-2641 9 bp Feature: gene Location: 26750-27019 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK15285 (fimbrial chaperone StfD), FimA (pfam16970), RVT-UG4, SCPU (smart00972)