myRT

myRT report for GCA_013111685.1_ASM1311168v1

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Seq: JAACMB010000045.1 Vibrio cholerae strain M20 52496_569_Vc_T20_, whole genome shotgun sequence (52271 bp)
Overview 1 RT 1: 5078-10825 bp Neighborhood of RT #1 [5078, 10845] tdh RVT-Retrons AAA_15 AAA_15 Hypoth_Ymh Feature: gene Location: 5078-6109 bp Feature: domain Description: tdh Location: 5087-6107 bp Feature: domain Description: tdh Location: 5087-61 07 bp Feature: gene Location: 6184-6483 bp Feature: gene Location: 6504-7604 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 6648-7203 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 6648-7203 bp Feature: gene Location: 7780-9897 bp Feature: domain Description: AAA_15 Location: 7783-8200 bp Feature: domain Description: AAA_1 5 Location: 7783-8200 bp Feature: domain Description: AAA_15 Location: 8335-8764 bp Feature: domain Description: AAA_1 5 Location: 8335-8764 bp Feature: gene Location: 10045-10845 bp Feature: domain Description: Hypoth_Ymh Location: 10465-10825 bp Feature: domain Description: Hypoth_Ymh Location: 1 0465-1 0825 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Hypoth_Ymh (pfam09509), tdh (TIGR00692), RVT-Retrons, AAA_15 (pfam13175)

Seq: JAACMB010000069.1 Vibrio cholerae strain M20 52520_569_Vc_T20_, whole genome shotgun sequence (334643 bp)
Overview 1 RT 1: 114526-119761 bp Neighborhood of RT #1 [114526, 119787] TIGR02646 COG3950 RVT-Retrons LysR Feature: gene Location: 114526-115143 bp Feature: domain Description: TIGR02646 Location: 114637-115021 bp Feature: domain Description: TIGR02 646 Location: 114637-11502 1 bp Feature: gene Location: 115156-116778 bp Feature: domain Description: COG3950 Location: 115342-116773 bp Feature: domain Description: COG3950 Location: 115342 -116773 bp Feature: gene Location: 116779-117726 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 116893-117490 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 116893-117490 bp Feature: gene Location: 118652-118924 bp Feature: gene Location: 118927-119787 bp Feature: domain Description: LysR Location: 118933-119761 bp Feature: domain Description: LysR Location: 118933-119761 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TIGR02646 (TIGR02646 family protein), COG3950 (Predicted ATP-binding protein involved in virulence ), RVT-Retrons, LysR (COG0583)