myRT

myRT report for GCA_013111935.1_ASM1311193v1

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Seq: JAACLR010000058.1 Vibrio cholerae strain M10 51573_560_Vc_T10_, whole genome shotgun sequence (73270 bp)
Overview 1 RT 1: 5823-9593 bp Neighborhood of RT #1 [5823, 9622] RVT-UG4 PRK09776 PAS_9 PleD Feature: gene Location: 5823-6530 bp Feature: gene Location: 6424-6678 bp Feature: gene Location: 6725-7399 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 7043-7298 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 7043-7298 bp Feature: gene Location: 7454-7996 bp Feature: gene Location: 8351-9622 bp Feature: domain Description: PRK09776 Location: 8459-8765 bp Feature: domain Description: PRK09776 Location: 8459-8765 bp Feature: domain Description: PAS_9 Location: 8783-9089 bp Feature: domain Description: PAS_9 Location: 8783-9089 bp Feature: domain Description: PleD Location: 9089-9593 bp Feature: domain Description: PleD Location: 9089-9593 bp Sorry, your browser does not support inline SVG.
Associated domains:Seq: JAACLR010000067.1 Vibrio cholerae strain M10 51582_560_Vc_T10_, whole genome shotgun sequence (103655 bp)
Overview 1 RT 1: 66198-71922 bp Neighborhood of RT #1 [66198, 71922] groEL RVT_N RVT-GII GIIM HNHc DUF2188 Feature: gene Location: 66198-67832 bp Feature: domain Description: groEL Location: 66204-67827 bp Feature: domain Description: groEL Location: 662 04-6782 7 bp Feature: gene Location: 68354-68515 bp Feature: gene Location: 68928-70628 bp Feature: domain Description: RVT_N Location: 69000-69243 bp Feature: domain Description: RVT_N Location: 69000-692 43 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 69288-69933 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 692 88-69933 bp Feature: domain Description: GIIM Note: maturase Location: 69984-70218 bp Feature: domain Description: GIIM Note: maturase Location: 69984-702 18 bp Feature: domain Description: HNHc Note: nucleases Location: 70434-70596 bp Feature: domain Description: HNHc Note: nucleases Location: 70434-70596 bp Feature: gene Location: 70814-71035 bp Feature: domain Description: DUF2188 Location: 70829-71006 bp Feature: domain Description: DUF2 188 Location: 7082 9-71006 bp Feature: gene Location: 71362-71922 bp Sorry, your browser does not support inline SVG.
Associated domains:Seq: JAACLR010000093.1 Vibrio cholerae strain M10 51608_560_Vc_T10_, whole genome shotgun sequence (94633 bp)
Overview 1 RT 1: 2745-7705 bp Neighborhood of RT #1 [2745, 7705] Phage_int_SAM_5 INT_ICEBs1_C_like RVT_N RVT-GII GIIM RAMA Feature: gene Location: 2745-4010 bp Feature: domain Description: Phage_int_SAM_5 Location: 2880-3120 bp Feature: domain Description: Phage_int_SAM_5 Location: 2880-3 120 bp Feature: domain Description: INT_ICEBs1_C_like Location: 3183-3756 bp Feature: domain Description: INT_ICEBs1_C_like Location: 3 183 -3 756 bp Feature: gene Location: 4229-4438 bp Feature: gene Location: 4721-6193 bp Feature: domain Description: RVT_N Location: 4769-5012 bp Feature: domain Description: RVT_N Location: 4769-5012 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5057-5684 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5057-5684 bp Feature: domain Description: GIIM Note: maturase Location: 5747-5969 bp Feature: domain Description: GIIM Note: maturase Location: 5747-5969 bp Feature: gene Location: 6853-7401 bp Feature: domain Description: RAMA Location: 7192-7351 bp Feature: domain Description: RAMA Location: 7192-73 51 bp Feature: gene Location: 7406-7705 bp Sorry, your browser does not support inline SVG.
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