myRT

myRT report for GCA_013114115.1_ASM1311411v1

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Seq: VTYC01000044.1 Vibrio sp. 070316B scaffold_43, whole genome shotgun sequence (40604 bp)
Overview 1 RT 1: 2724-9437 bp Neighborhood of RT #1 [2724, 9445] PRK11479 RVT-UG2 PRK05367 PRK01202 Feature: gene Location: 2724-3134 bp Feature: gene Location: 3303-4016 bp Feature: domain Description: PRK11479 Location: 3306-3606 bp Feature: domain Description: PRK1 1 479 Location: 3306-3606 bp Feature: gene Location: 4477-5760 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 4678-5461 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 4678-5461 bp Feature: gene Location: 6095-8974 bp Feature: domain Description: PRK05367 Location: 6134-8969 bp Feature: domain Description: PRK05367 Location: 61 34-8969 bp Feature: gene Location: 9065-9445 bp Feature: domain Description: PRK01202 Location: 9074-9437 bp Feature: domain Description: PRK01 202 Location: 9074-9437 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK11479 (YaeF family permuted papain-like enzyme), RVT-UG2, PRK05367 (aminomethyl-transferring glycine dehydrogenase), PRK01202 (glycine cleavage system protein GcvH)

Seq: VTYC01000046.1 Vibrio sp. 070316B scaffold_45, whole genome shotgun sequence (35457 bp)
Overview 1 RT 1: 14518-18864 bp Neighborhood of RT #1 [14518, 18864] TIGR02646 COG3950 RVT-Retrons PyocinActivator Feature: gene Location: 14518-15255 bp Feature: domain Description: TIGR02646 Location: 14605-15079 bp Feature: domain Description: TIGR02 646 Location: 14605-15079 bp Feature: gene Location: 15252-16886 bp Feature: domain Description: COG3950 Location: 15462-16818 bp Feature: domain Description: COG3950 Location: 15462 -16818 bp Feature: gene Location: 16876-17817 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 16978-17572 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 16978-17572 bp Feature: gene Location: 18253-18483 bp Feature: domain Description: PyocinActivator Location: 18271-18478 bp Feature: domain Description: PyocinActivator Location: 182 71-18478 bp Feature: gene Location: 18709-18864 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TIGR02646 (TIGR02646 family protein), COG3950 (Predicted ATP-binding protein involved in virulence ), RVT-Retrons, PyocinActivator (pfam11112)

Seq: VTYC01000009.1 Vibrio sp. 070316B scaffold_8, whole genome shotgun sequence (241909 bp)
Overview 1 RT 1: 128798-134547 bp Neighborhood of RT #1 [128798, 134547] TIGR02646 COG3950 RVT-Retrons COG5545 Feature: gene Location: 128798-129601 bp Feature: domain Description: TIGR02646 Location: 128900-129404 bp Feature: domain Description: TIGR02646 Location: 128900-129404 bp Feature: gene Location: 129588-131201 bp Feature: domain Description: COG3950 Location: 129771-131124 bp Feature: domain Description: COG3 950 Location: 129771-13 1124 bp Feature: gene Location: 131204-132316 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 131474-132071 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 13 1474-13 2071 bp Feature: gene Location: 132654-133910 bp Feature: domain Description: COG5545 Location: 132924-133704 bp Feature: domain Description: COG5545 Location: 13 2924-13 3 704 bp Feature: gene Location: 134374-134547 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TIGR02646 (TIGR02646 family protein), COG3950 (Predicted ATP-binding protein involved in virulence ), RVT-Retrons, COG5545 (Predicted P-loop ATPase and inactivated derivatives )