myRT

myRT report for GCA_013114145.1_ASM1311414v1

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Seq: VTYB01000101.1 Vibrio cyclitrophicus strain 070116B scaffold_100, whole genome shotgun sequence (2078 bp)
Overview 1 RT 1: 189-1825 bp Neighborhood of RT #1 [189, 2049] RVT_N RVT-GII GIIM Feature: gene Location: 189-503 bp Feature: gene Location: 547-2049 bp Feature: domain Description: RVT_N Location: 625-868 bp Feature: domain Description: RVT_N Location: 625-868 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 913-1540 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 91 3-1 540 bp Feature: domain Description: GIIM Note: maturase Location: 1600-1825 bp Feature: domain Description: GIIM Note: maturase Location: 1 600-1 825 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: VTYB01000104.1 Vibrio cyclitrophicus strain 070116B scaffold_103, whole genome shotgun sequence (1364 bp)
Overview 1 RT 1: 3-1170 bp Neighborhood of RT #1 [3, 1361] RVT_N RVT-GII GIIM Feature: gene Location: 3-1361 bp Feature: domain Description: RVT_N Location: 6-213 bp Feature: domain Description: RVT_N Location: 6-2 13 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 258-885 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 58-885 bp Feature: domain Description: GIIM Note: maturase Location: 945-1170 bp Feature: domain Description: GIIM Note: maturase Location: 945-1170 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: VTYB01000057.1 Vibrio cyclitrophicus strain 070116B scaffold_56, whole genome shotgun sequence (22753 bp)
Overview 1 RT 1: 3-3591 bp Neighborhood of RT #1 [3, 3591] RVT-UG8 Feature: gene Location: 3-1796 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 381-828 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 3 81-828 bp Feature: gene Location: 2226-2438 bp Feature: gene Location: 2662-3591 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG8

Seq: VTYB01000085.1 Vibrio cyclitrophicus strain 070116B scaffold_84, whole genome shotgun sequence (5414 bp)
Overview 1 RT 1: 530-3804 bp Neighborhood of RT #1 [530, 3887] RVT-Retrons Arm-DNA-bind_3 INT_Rci_Hp1_C Feature: gene Location: 530-1456 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 629-1214 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 629-1214 bp Feature: gene Location: 1446-2492 bp Feature: gene Location: 2685-3887 bp Feature: domain Description: Arm-DNA-bind_3 Location: 2712-2982 bp Feature: domain Description: Arm-DNA-bind_3 Location: 2712-2982 bp Feature: domain Description: INT_Rci_Hp1_C Location: 3303-3804 bp Feature: domain Description: INT_Rci_Hp1_C Location: 3303-3804 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, Arm-DNA-bind_3 (pfam13356), INT_Rci_Hp1_C (cd00796)

Seq: VTYB01000089.1 Vibrio cyclitrophicus strain 070116B scaffold_88, whole genome shotgun sequence (4180 bp)
Overview 1 RT 1: 528-3987 bp Neighborhood of RT #1 [528, 4178] RVT_N RVT-GII GIIM RVT_N RVT-GII GIIM Feature: gene Location: 528-725 bp Feature: gene Location: 803-2275 bp Feature: domain Description: RVT_N Location: 851-1094 bp Feature: domain Description: RVT_N Location: 85 1-1094 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1139-1766 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1139-1766 bp Feature: domain Description: GIIM Note: maturase Location: 1823-2051 bp Feature: domain Description: GIIM Note: maturase Location: 1823-205 1 bp Feature: gene Location: 2361-2504 bp Feature: gene Location: 2739-4178 bp Feature: domain Description: RVT_N Location: 2787-3030 bp Feature: domain Description: RVT_N Location: 2787-3030 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3075-3702 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3075 -3702 bp Feature: domain Description: GIIM Note: maturase Location: 3762-3987 bp Feature: domain Description: GIIM Note: maturase Location: 3762-3987 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)