myRT

myRT report for GCA_013114285.1_ASM1311428v1

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Seq: VTXU01000180.1 Vibrio mediterranei strain 71105 07-11-05_SC179, whole genome shotgun sequence (6558 bp)
Overview 1 RT 1: 3121-4679 bp Neighborhood of RT #1 [3121, 4679] RVT-GII GIIM InsE Feature: gene Location: 3121-3381 bp Feature: gene Location: 3400-3555 bp Feature: gene Location: 3580-4164 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3607-3817 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3607-381 7 bp Feature: domain Description: GIIM Note: maturase Location: 3877-4102 bp Feature: domain Description: GIIM Note: maturase Location: 3877-41 02 bp Feature: gene Location: 4231-4515 bp Feature: domain Description: InsE Location: 4243-4507 bp Feature: domain Description: InsE Location: 4243-4507 bp Feature: gene Location: 4530-4679 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), InsE (COG2963)

Seq: VTXU01000286.1 Vibrio mediterranei strain 71105 07-11-05_SC285, whole genome shotgun sequence (1861 bp)
Overview 1 RT 1: 383-1698 bp Neighborhood of RT #1 [383, 1784] RVT-GII GIIM Feature: gene Location: 383-559 bp Feature: gene Location: 537-1784 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 741-1398 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 741-1398 bp Feature: domain Description: GIIM Note: maturase Location: 1476-1698 bp Feature: domain Description: GIIM Note: maturase Location: 1476-1698 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: VTXU01000031.1 Vibrio mediterranei strain 71105 07-11-05_SC30, whole genome shotgun sequence (51047 bp)
Overview 1 RT 1: 13504-22007 bp Neighborhood of RT #1 [13504, 22007] hsdR HsdR RVT-UG1 Feature: gene Location: 13504-14388 bp Feature: domain Description: hsdR Location: 13591-14281 bp Feature: domain Description: hsdR Location: 13 591-14281 bp Feature: gene Location: 14592-17102 bp Feature: domain Description: HsdR Location: 14661-17025 bp Feature: domain Description: HsdR Location: 14661-17025 bp Feature: gene Location: 17172-21020 bp Feature: RT Description: RVT-UG1 Note: UG1 RT Location: 17838-18360 bp Feature: RT Description: RVT-UG1 Note: UG1 RT Location: 1783 8-183 60 bp Feature: gene Location: 21562-21819 bp Feature: gene Location: 21879-22007 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT hsdR (TIGR00348), HsdR (COG4096), RVT-UG1

Seq: VTXU01000304.1 Vibrio mediterranei strain 71105 07-11-05_SC303, whole genome shotgun sequence (1550 bp)
Overview 1 RT 1: 232-1393 bp Neighborhood of RT #1 [232, 1485] RVT-GII GIIM Feature: gene Location: 232-1485 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 436-1090 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4 36-1090 bp Feature: domain Description: GIIM Note: maturase Location: 1174-1393 bp Feature: domain Description: GIIM Note: maturase Location: 1174 -1393 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)