myRT

myRT report for GCA_013114615.1_ASM1311461v1

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Seq: VTXC01000019.1 Vibrio pectenicida strain 99-46-Y scaffold_18, whole genome shotgun sequence (75384 bp)
Overview 1 RT 1: 14914-22755 bp Neighborhood of RT #1 [14914, 22937] PRK11091 PAS PleD PRK11091 RVT-Retrons COG3950 TIGR02646 Feature: gene Location: 14914-16662 bp Feature: domain Description: PRK11091 Location: 15277-15505 bp Feature: domain Description: PRK1 1 091 Location: 1 5277-1 5505 bp Feature: domain Description: PAS Location: 15757-16087 bp Feature: domain Description: PAS Location: 1 5757-1 6087 bp Feature: domain Description: PleD Location: 16087-16645 bp Feature: domain Description: PleD Location: 1 6087-1 6645 bp Feature: gene Location: 16743-19082 bp Feature: domain Description: PRK11091 Location: 16746-19077 bp Feature: domain Description: PRK1 1 091 Location: 1 6746-1 9077 bp Feature: gene Location: 19683-20627 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 19797-20388 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 9797-20388 bp Feature: gene Location: 20620-22260 bp Feature: domain Description: COG3950 Location: 20818-22204 bp Feature: domain Description: COG3950 Location: 2081 8-22204 bp Feature: gene Location: 22266-22937 bp Feature: domain Description: TIGR02646 Location: 22356-22755 bp Feature: domain Description: TIGR02646 Location: 22356-22755 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK11091 (aerobic respiration control sensor protein ArcB; Provisional), PAS (smart00091), PleD (COG3706), RVT-Retrons, COG3950 (Predicted ATP-binding protein involved in virulence ), TIGR02646 (TIGR02646 family protein)

Seq: VTXC01000010.1 Vibrio pectenicida strain 99-46-Y scaffold_9, whole genome shotgun sequence (93862 bp)
Overview 1 RT 1: 22921-27050 bp Neighborhood of RT #1 [22921, 27050] RVT_N RVT-GII GIIM HNHc glpX Feature: gene Location: 22921-23055 bp Feature: gene Location: 23133-23423 bp Feature: RT Description: RVT_N Location: 23190-23388 bp Feature: RT Description: RVT_N Location: 2 3190-2 3388 bp Feature: gene Location: 23534-24817 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23537-24122 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 3537-2 412 2 bp Feature: domain Description: GIIM Note: maturase Location: 24173-24407 bp Feature: domain Description: GIIM Note: maturase Location: 2 4173-2 4407 bp Feature: domain Description: HNHc Note: nucleases Location: 24623-24785 bp Feature: domain Description: HNHc Note: nucleases Location: 2 462 3-2 4785 bp Feature: gene Location: 25403-26410 bp Feature: domain Description: glpX Location: 25409-26366 bp Feature: domain Description: glpX Location: 2 5409-2 6366 bp Feature: gene Location: 26640-27050 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), glpX (TIGR00330)