myRT

myRT report for GCA_013116665.1_ASM1311666v1

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Seq: JABFJY010000134.1 Corallococcus coralloides strain CA044C NODE_134_length_25209_cov_24.6719, whole genome shotgun sequence (25209 bp)
Overview 1 RT 1: 6239-19101 bp Neighborhood of RT #1 [6239, 19166] BetA BetA BetA DAP2 RVT-Retrons SWIM WD40 HEAT_2 HEAT_2 HEAT_2 HEAT_2 HEAT_2 HEAT_2 HEAT_2 HEAT_2 HEAT_2 HEAT_2 HEAT_2 HEAT_2 HEAT_2 Feature: gene Location: 6239-7762 bp Feature: domain Description: BetA Location: 6245-6776 bp Feature: domain Description: BetA Location: 6245-6776 bp Feature: domain Description: BetA Location: 6866-7178 bp Feature: domain Description: BetA Location: 6866-71 78 bp Feature: domain Description: BetA Location: 7307-7745 bp Feature: domain Description: BetA Location: 7307-7745 bp Feature: gene Location: 7936-8922 bp Feature: domain Description: DAP2 Location: 8080-8530 bp Feature: domain Description: DAP2 Location: 8080-8530 bp Feature: gene Location: 8932-10377 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 9487-10129 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 9487-1 01 29 bp Feature: gene Location: 10777-12636 bp Feature: domain Description: SWIM Location: 12247-12331 bp Feature: domain Description: SWIM Location: 1 2247-1 2331 bp Feature: gene Location: 12633-19166 bp Feature: domain Description: WD40 Location: 12663-13548 bp Feature: domain Description: WD40 Location: 1 2663-1 3548 bp Feature: domain Description: HEAT_2 Location: 13716-13890 bp Feature: domain Description: HEAT_2 Location: 1 371 6-1 3890 bp Feature: domain Description: HEAT_2 Location: 14472-14721 bp Feature: domain Description: HEAT_2 Location: 1 4472-1 4721 bp Feature: domain Description: HEAT_2 Location: 14763-14967 bp Feature: domain Description: HEAT_2 Location: 1 4763-1 4967 bp Feature: domain Description: HEAT_2 Location: 15144-15366 bp Feature: domain Description: HEAT_2 Location: 1 51 44-1 5366 bp Feature: domain Description: HEAT_2 Location: 15633-15825 bp Feature: domain Description: HEAT_2 Location: 1 5633-1 5825 bp Feature: domain Description: HEAT_2 Location: 15915-16038 bp Feature: domain Description: HEAT_2 Location: 1 591 5-1 6038 bp Feature: domain Description: HEAT_2 Location: 16452-16641 bp Feature: domain Description: HEAT_2 Location: 1 6452-1 6641 bp Feature: domain Description: HEAT_2 Location: 16683-16896 bp Feature: domain Description: HEAT_2 Location: 1 6683-1 6896 bp Feature: domain Description: HEAT_2 Location: 16947-17163 bp Feature: domain Description: HEAT_2 Location: 1 6947-1 71 63 bp Feature: domain Description: HEAT_2 Location: 17388-17598 bp Feature: domain Description: HEAT_2 Location: 1 7388-1 7598 bp Feature: domain Description: HEAT_2 Location: 17916-18153 bp Feature: domain Description: HEAT_2 Location: 1 791 6-1 81 53 bp Feature: domain Description: HEAT_2 Location: 18657-18813 bp Feature: domain Description: HEAT_2 Location: 1 8657-1 881 3 bp Feature: domain Description: HEAT_2 Location: 18948-19101 bp Feature: domain Description: HEAT_2 Location: 1 8948-1 91 01 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SWIM (pfam04434), WD40 (smart00320), HEAT_2 (pfam13646), BetA (COG2303), DAP2 (COG1506), RVT-Retrons

Seq: JABFJY010000259.1 Corallococcus coralloides strain CA044C NODE_259_length_11844_cov_42.8089, whole genome shotgun sequence (11844 bp)
Overview 1 RT 1: 60-2529 bp Neighborhood of RT #1 [60, 2529] RVT-GII GIIM Feature: gene Location: 60-281 bp Feature: gene Location: 476-1786 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 761-1379 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 761-1379 bp Feature: domain Description: GIIM Note: maturase Location: 1451-1676 bp Feature: domain Description: GIIM Note: maturase Location: 1451-1676 bp Feature: gene Location: 1816-2079 bp Feature: gene Location: 2242-2529 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: JABFJY010000484.1 Corallococcus coralloides strain CA044C NODE_484_length_1177_cov_84.5171, whole genome shotgun sequence (1177 bp)
Overview 1 RT 1: 1-1054 bp Neighborhood of RT #1 [1, 1176] RVT-GII Feature: gene Location: 1-1176 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 364-1054 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 64-1054 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII