myRT

myRT report for GCA_013116825.1_ASM1311682v1

Download annotations/find similar RTs

Seq: JABFNS010000145.1 Myxococcus xanthus strain AM003 NODE_145_length_22611_cov_41.5669, whole genome shotgun sequence (22611 bp)
Overview 1 RT 1: 712-7626 bp Neighborhood of RT #1 [712, 7811] RVT-Retrons COG3791 EpmB EpmB Feature: gene Location: 712-2622 bp Feature: gene Location: 2619-4217 bp Feature: gene Location: 4396-5679 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4861-5464 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4861 -5464 bp Feature: gene Location: 5688-6107 bp Feature: domain Description: COG3791 Location: 5712-6069 bp Feature: domain Description: COG3791 Location: 571 2-6069 bp Feature: gene Location: 6477-7811 bp Feature: domain Description: EpmB Location: 6540-6726 bp Feature: domain Description: EpmB Location: 6540-6726 bp Feature: domain Description: EpmB Location: 6870-7626 bp Feature: domain Description: EpmB Location: 6870-7626 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, COG3791 (Uncharacterized conserved protein ), EpmB (COG1509)

Seq: JABFNS010000074.1 Myxococcus xanthus strain AM003 NODE_74_length_44548_cov_44.5083, whole genome shotgun sequence (44548 bp)
Overview 1 RT 1: 919-13619 bp Neighborhood of RT #1 [919, 13708] BetA BetA BetA DAP2 RVT-Retrons WD40 HEAT_2 HEAT_2 HEAT_2 HEAT_2 HEAT_2 HEAT_2 HEAT_2 HEAT_2 HEAT_2 HEAT_2 HEAT_2 Feature: gene Location: 919-2319 bp Feature: domain Description: BetA Location: 1030-1306 bp Feature: domain Description: BetA Location: 1030-1306 bp Feature: domain Description: BetA Location: 1447-1750 bp Feature: domain Description: BetA Location: 1447-1750 bp Feature: domain Description: BetA Location: 1885-2299 bp Feature: domain Description: BetA Location: 1885-2 2 99 bp Feature: gene Location: 2594-3460 bp Feature: domain Description: DAP2 Location: 2720-3440 bp Feature: domain Description: DAP2 Location: 2 72 0-3440 bp Feature: gene Location: 3464-4921 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4022-4664 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 402 2 -4664 bp Feature: gene Location: 5322-7175 bp Feature: gene Location: 7172-13708 bp Feature: domain Description: WD40 Location: 7331-8027 bp Feature: domain Description: WD40 Location: 7331-802 7 bp Feature: domain Description: HEAT_2 Location: 8249-8459 bp Feature: domain Description: HEAT_2 Location: 82 49-8459 bp Feature: domain Description: HEAT_2 Location: 9014-9263 bp Feature: domain Description: HEAT_2 Location: 9014-92 63 bp Feature: domain Description: HEAT_2 Location: 9503-9734 bp Feature: domain Description: HEAT_2 Location: 9503-9734 bp Feature: domain Description: HEAT_2 Location: 10175-10325 bp Feature: domain Description: HEAT_2 Location: 10175-1032 5 bp Feature: domain Description: HEAT_2 Location: 10433-10595 bp Feature: domain Description: HEAT_2 Location: 10433-10595 bp Feature: domain Description: HEAT_2 Location: 10955-11144 bp Feature: domain Description: HEAT_2 Location: 10955-11144 bp Feature: domain Description: HEAT_2 Location: 11189-11396 bp Feature: domain Description: HEAT_2 Location: 11189-11396 bp Feature: domain Description: HEAT_2 Location: 11543-11795 bp Feature: domain Description: HEAT_2 Location: 11543-11795 bp Feature: domain Description: HEAT_2 Location: 12407-12623 bp Feature: domain Description: HEAT_2 Location: 12 407-12 62 3 bp Feature: domain Description: HEAT_2 Location: 13103-13355 bp Feature: domain Description: HEAT_2 Location: 13103-13355 bp Feature: domain Description: HEAT_2 Location: 13481-13619 bp Feature: domain Description: HEAT_2 Location: 13481-13619 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DAP2 (COG1506), RVT-Retrons, WD40 (smart00320), HEAT_2 (pfam13646)