myRT

myRT report for GCA_013131465.1_ASM1313146v1

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Seq: JAAGEE010000023.1 Escherichia coli strain MH10 contig23_MH10, whole genome shotgun sequence (69978 bp)
Overview 1 RT 1: 30063-33396 bp Neighborhood of RT #1 [30063, 33396] PBP2_CrgA_like_5 RVT-Retrons Feature: gene Location: 30063-30473 bp Feature: domain Description: PBP2_CrgA_like_5 Location: 30135-30447 bp Feature: domain Description: PBP2_CrgA_like_5 Location: 301 35-30447 bp Feature: gene Location: 30590-30811 bp Feature: gene Location: 31333-32265 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 31435-32026 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 31 435-32026 bp Feature: gene Location: 32252-33220 bp Feature: gene Location: 33253-33396 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PBP2_CrgA_like_5 (cd08474), RVT-Retrons

Seq: JAAGEE010000031.1 Escherichia coli strain MH10 contig31_MH10, whole genome shotgun sequence (37558 bp)
Overview 1 RT 1: 19312-22430 bp Neighborhood of RT #1 [19312, 22430] RVT-GII InsA Feature: gene Location: 19312-19518 bp Feature: gene Location: 19852-20061 bp Feature: gene Location: 20196-21437 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20463-21294 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 0463-2 12 94 bp Feature: gene Location: 21853-22128 bp Feature: domain Description: InsA Location: 21856-22123 bp Feature: domain Description: InsA Location: 2 1856-2 2 12 3 bp Feature: gene Location: 22269-22430 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, InsA (COG3677)

Seq: JAAGEE010000009.1 Escherichia coli strain MH10 contig9_MH10, whole genome shotgun sequence (169182 bp)
Overview 1 RT 1: 536-7986 bp Neighborhood of RT #1 [536, 7997] RVT-UG8 INT_Rci_Hp1_C INT_P4_C mutS1 Feature: gene Location: 536-2554 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 1106-1556 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 1106-1556 bp Feature: gene Location: 3810-5270 bp Feature: domain Description: INT_Rci_Hp1_C Location: 4185-4392 bp Feature: domain Description: INT_Rci_Hp1_C Location: 4185-43 92 bp Feature: domain Description: INT_P4_C Location: 4611-5148 bp Feature: domain Description: INT_P4_C Location: 4611-5148 bp Feature: gene Location: 5415-7997 bp Feature: domain Description: mutS1 Location: 5466-7986 bp Feature: domain Description: mutS1 Location: 5466-7986 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG8, INT_Rci_Hp1_C (cd00796), INT_P4_C (cd00801), mutS1 (TIGR01070)