myRT

myRT report for GCA_013138965.1_ASM1313896v1

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Seq: WTBT01000057.1 Candidatus Aegiribacteria sp. isolate GLR63 c_000000165067, whole genome shotgun sequence (79227 bp)
Overview 1 RT 1: 1234-6955 bp Neighborhood of RT #1 [1234, 7332] RVT-GII DDE_Tnp_ISAZ013 RVT-GII GIIM Transglut_core Feature: gene Location: 1234-2280 bp Feature: gene Location: 2905-3129 bp Feature: gene Location: 3171-3917 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3477-3900 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3477-3900 bp Feature: gene Location: 3968-5176 bp Feature: domain Description: DDE_Tnp_ISAZ013 Location: 4253-5171 bp Feature: domain Description: DDE_Tnp_ISAZ01 3 Location: 4253-51 71 bp Feature: gene Location: 5267-5806 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5270-5453 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5270-5453 bp Feature: domain Description: GIIM Note: maturase Location: 5543-5738 bp Feature: domain Description: GIIM Note: maturase Location: 5543-5738 bp Feature: gene Location: 5983-6165 bp Feature: gene Location: 6325-7332 bp Feature: domain Description: Transglut_core Location: 6670-6955 bp Feature: domain Description: Transglut_core Location: 6670-6955 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, DDE_Tnp_ISAZ013 (pfam07592), GIIM (pfam08388), Transglut_core (pfam01841)

Seq: WTBT01000003.1 Candidatus Aegiribacteria sp. isolate GLR63 c_000000175500, whole genome shotgun sequence (101202 bp)
Overview 1 RT 1: 27754-30124 bp Neighborhood of RT #1 [27754, 30124] upstrm_HI1419 dnstrm_HI1420 RVT-GII Feature: gene Location: 27754-28050 bp Feature: domain Description: upstrm_HI1419 Location: 27769-28045 bp Feature: domain Description: upstrm_HI1419 Location: 2 7769-2 8045 bp Feature: gene Location: 28061-28360 bp Feature: domain Description: dnstrm_HI1420 Location: 28076-28343 bp Feature: domain Description: dnstrm_HI142 0 Location: 2 8076-2 8343 bp Feature: gene Location: 28504-28806 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 28510-28606 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 8510-2 8606 bp Feature: gene Location: 29033-29368 bp Feature: gene Location: 29441-30124 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT upstrm_HI1419 (TIGR02683), dnstrm_HI1420 (TIGR02684), RVT-GII

Seq: WTBT01000085.1 Candidatus Aegiribacteria sp. isolate GLR63 c_000000401190, whole genome shotgun sequence (3928 bp)
Overview 1 RT 1: 982-3825 bp Neighborhood of RT #1 [982, 3926] Acetyltransf_1 NHL_like_6 RVT-GII GIIM Feature: gene Location: 982-1446 bp Feature: domain Description: Acetyltransf_1 Location: 1135-1408 bp Feature: domain Description: Acetyltransf_1 Location: 113 5-1408 bp Feature: gene Location: 1618-2781 bp Feature: domain Description: NHL_like_6 Location: 1816-1966 bp Feature: domain Description: NHL_like_6 Location: 1816-1966 bp Feature: gene Location: 2892-3926 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2895-3558 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2895-3 558 bp Feature: domain Description: GIIM Note: maturase Location: 3633-3825 bp Feature: domain Description: GIIM Note: maturase Location: 3 63 3 -3 825 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Acetyltransf_1 (pfam00583), NHL_like_6 (cd14962), RVT-GII, GIIM (pfam08388)

Seq: WTBT01000062.1 Candidatus Aegiribacteria sp. isolate GLR63 c_000000401777, whole genome shotgun sequence (5119 bp)
Overview 1 RT 1: 3-1892 bp Neighborhood of RT #1 [3, 1939] RVT-GII CopG_antitoxin Feature: gene Location: 3-1037 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6-669 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6-669 bp Feature: gene Location: 1210-1383 bp Feature: gene Location: 1724-1939 bp Feature: domain Description: CopG_antitoxin Location: 1736-1892 bp Feature: domain Description: CopG_antitoxin Location: 1736-1892 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, CopG_antitoxin (pfam12441)

Seq: WTBT01000008.1 Candidatus Aegiribacteria sp. isolate GLR63 c_000000667328, whole genome shotgun sequence (7168 bp)
Overview 1 RT 1: 1-5584 bp Neighborhood of RT #1 [1, 6831] RVT-UG7 AAA_15 TOPRIM_OLD YeeA HsdM Feature: gene Location: 1-162 bp Feature: gene Location: 446-2008 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 845-1253 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 845 -125 3 bp Feature: gene Location: 2075-3889 bp Feature: domain Description: AAA_15 Location: 2078-3239 bp Feature: domain Description: AAA_15 Location: 2078-3239 bp Feature: domain Description: TOPRIM_OLD Location: 3395-3647 bp Feature: domain Description: TOPRIM_OLD Location: 3395 -3647 bp Feature: gene Location: 3994-6831 bp Feature: domain Description: YeeA Location: 4576-4999 bp Feature: domain Description: YeeA Location: 45 76-4999 bp Feature: domain Description: HsdM Location: 5386-5584 bp Feature: domain Description: HsdM Location: 5 386-5 5 84 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG7, AAA_15 (pfam13175), TOPRIM_OLD (cd01026), YeeA (COG1002), HsdM (COG0286)