myRT

myRT report for GCA_013139755.1_ASM1313975v1

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Seq: WTAG01000145.1 Methylomarinum sp. isolate GLR15 c_000000190549, whole genome shotgun sequence (4737 bp)
Overview 1 RT 1: 3-4357 bp Neighborhood of RT #1 [3, 4398] ANK TnpB_IS66 RVT-GII LZ_Tnp_IS66 zf-IS66 DDE_Tnp_IS66 DDE_Tnp_IS66_C Feature: gene Location: 3-413 bp Feature: domain Description: ANK Location: 24-267 bp Feature: domain Description: ANK Location: 24-267 bp Feature: gene Location: 476-805 bp Feature: domain Description: TnpB_IS66 Location: 503-788 bp Feature: domain Description: TnpB_IS66 Location: 503-788 bp Feature: gene Location: 1195-2562 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1531-2209 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 531 -2209 bp Feature: gene Location: 2581-2787 bp Feature: gene Location: 2893-4398 bp Feature: domain Description: LZ_Tnp_IS66 Location: 2998-3208 bp Feature: domain Description: LZ_Tnp_IS66 Location: 2998-3208 bp Feature: domain Description: zf-IS66 Location: 3238-3367 bp Feature: domain Description: zf-IS66 Location: 3238-3367 bp Feature: domain Description: DDE_Tnp_IS66 Location: 3409-4243 bp Feature: domain Description: DDE_Tnp_IS66 Location: 3409-4243 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 4264-4357 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 4264-4357 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, LZ_Tnp_IS66 (pfam13007), zf-IS66 (pfam13005), DDE_Tnp_IS66 (pfam03050), DDE_Tnp_IS66_C (pfam13817), ANK (smart00248), TnpB_IS66 (pfam05717)

Seq: WTAG01000373.1 Methylomarinum sp. isolate GLR15 c_000000325334, whole genome shotgun sequence (2589 bp)
Overview 1 RT 1: 2-2060 bp Neighborhood of RT #1 [2, 2236] Por_Secre_tail RVT-GII RVT-GII GIIM Feature: gene Location: 2-289 bp Feature: domain Description: Por_Secre_tail Location: 95-278 bp Feature: domain Description: Por_Secre_tail Location: 95-2 78 bp Feature: gene Location: 839-1276 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1175-1274 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1175-12 74 bp Feature: gene Location: 1382-2236 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1385-1793 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1385-1793 bp Feature: domain Description: GIIM Note: maturase Location: 1847-2060 bp Feature: domain Description: GIIM Note: maturase Location: 1847-2 060 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), Por_Secre_tail (TIGR04183)

Seq: WTAG01000330.1 Methylomarinum sp. isolate GLR15 c_000000635696, whole genome shotgun sequence (3201 bp)
Overview 1 RT 1: 3-3174 bp Neighborhood of RT #1 [3, 3200] RVT-GII GIIM Mrr_cat DDE_Tnp_1_6 Feature: gene Location: 3-1193 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 138-750 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13 8-750 bp Feature: domain Description: GIIM Note: maturase Location: 795-1002 bp Feature: domain Description: GIIM Note: maturase Location: 795-1002 bp Feature: gene Location: 1274-2272 bp Feature: domain Description: Mrr_cat Location: 1928-2174 bp Feature: domain Description: Mrr_cat Location: 1928-2174 bp Feature: gene Location: 2481-3200 bp Feature: domain Description: DDE_Tnp_1_6 Location: 2778-3174 bp Feature: domain Description: DDE_Tnp_1_6 Location: 2778-3 174 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Mrr_cat (pfam04471), DDE_Tnp_1_6 (pfam13751), RVT-GII, GIIM (pfam08388)