myRT

myRT report for GCA_013139765.1_ASM1313976v1

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Seq: WTAE01000072.1 Sulfurovum sp. isolate GLR145 c_000000022236, whole genome shotgun sequence (5811 bp)
Overview 1 RT 1: 1522-5747 bp Neighborhood of RT #1 [1522, 5809] Hpt1 COG1568 RVT-Retrons PRK11713 mcbC-like_oxidoreductase Feature: gene Location: 1522-2361 bp Feature: domain Description: Hpt1 Location: 1861-2008 bp Feature: domain Description: Hpt1 Location: 1 861 -2008 bp Feature: gene Location: 2362-2688 bp Feature: domain Description: COG1568 Location: 2389-2578 bp Feature: domain Description: COG1 568 Location: 2389-2578 bp Feature: gene Location: 2971-4014 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3199-3745 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 31 99-3745 bp Feature: gene Location: 4615-5349 bp Feature: domain Description: PRK11713 Location: 4627-5338 bp Feature: domain Description: PRK1 1 71 3 Location: 4627-5338 bp Feature: gene Location: 5447-5809 bp Feature: domain Description: mcbC-like_oxidoreductase Location: 5465-5747 bp Feature: domain Description: mcbC-like_oxidoreductase Location: 5465-5747 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Hpt1 (COG2236), COG1568 (Predicted methyltransferase ), RVT-Retrons, PRK11713 (16S ribosomal RNA methyltransferase RsmE; Provisional), mcbC-like_oxidoreductase

Seq: WTAE01000256.1 Sulfurovum sp. isolate GLR145 c_000000130037, whole genome shotgun sequence (12593 bp)
Overview 1 RT 1: 3-10589 bp Neighborhood of RT #1 [3, 10594] FIST NERD AE_Prim_S_like RVT-UG10 alr AguA Feature: gene Location: 3-578 bp Feature: domain Description: FIST Location: 93-573 bp Feature: domain Description: FIST Location: 93-573 bp Feature: gene Location: 1402-2166 bp Feature: domain Description: NERD Location: 1678-2008 bp Feature: domain Description: NERD Location: 1678-2 008 bp Feature: gene Location: 2188-7611 bp Feature: domain Description: AE_Prim_S_like Location: 2296-2590 bp Feature: domain Description: AE_Prim_S_like Location: 2 2 96-2 590 bp Feature: RT Description: RVT-UG10 Note: UG10 RT Location: 3553-4195 bp Feature: RT Description: RVT-UG10 Note: UG10 RT Location: 3553-4195 bp Feature: gene Location: 8508-9512 bp Feature: domain Description: alr Location: 8514-9507 bp Feature: domain Description: alr Location: 8514-9507 bp Feature: gene Location: 9587-10594 bp Feature: domain Description: AguA Location: 9596-10589 bp Feature: domain Description: AguA Location: 9596-10589 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FIST (smart00897), NERD (pfam08378), AE_Prim_S_like (cl01287), RVT-UG10, alr (TIGR00492), AguA (COG2957)

Seq: WTAE01000132.1 Sulfurovum sp. isolate GLR145 c_000000231827, whole genome shotgun sequence (5833 bp)
Overview 1 RT 1: 346-5379 bp Neighborhood of RT #1 [346, 5438] PRK10996 TrHb3_P RVT-UG5 COG4487 Feature: gene Location: 346-774 bp Feature: domain Description: PRK10996 Location: 358-766 bp Feature: domain Description: PRK10996 Location: 3 58-766 bp Feature: gene Location: 797-1183 bp Feature: domain Description: TrHb3_P Location: 818-1172 bp Feature: domain Description: TrHb3 _P Location: 818-1172 bp Feature: gene Location: 1485-3224 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 1902-2340 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 1902-23 40 bp Feature: gene Location: 3224-4132 bp Feature: gene Location: 4122-5438 bp Feature: domain Description: COG4487 Location: 4134-5379 bp Feature: domain Description: COG4487 Location: 413 4-53 79 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10996 (thioredoxin 2; Provisional), TrHb3_P (cd08916), RVT-UG5, COG4487 (Uncharacterized protein, contains DUF2130 domain )

Seq: WTAE01000162.1 Sulfurovum sp. isolate GLR145 c_000000232686, whole genome shotgun sequence (25723 bp)
Overview 1 RT 1: 18515-25296 bp Neighborhood of RT #1 [18515, 25328] 49 RVT-Retrons AAA_21 COG4487 Feature: gene Location: 18515-18967 bp Feature: gene Location: 19012-19554 bp Feature: domain Description: 49 Location: 19027-19375 bp Feature: domain Description: 4 9 Location: 19027-19375 bp Feature: gene Location: 20116-21492 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 20257-20809 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 20257-20809 bp Feature: gene Location: 21655-23883 bp Feature: domain Description: AAA_21 Location: 21730-22609 bp Feature: domain Description: AAA_21 Location: 21730-22609 bp Feature: gene Location: 24003-25328 bp Feature: domain Description: COG4487 Location: 24015-25296 bp Feature: domain Description: COG4 4 87 Location: 24 015-25296 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT 49 (PHA02565), RVT-Retrons, AAA_21 (pfam13304), COG4487 (Uncharacterized protein, contains DUF2130 domain )