myRT

myRT report for GCA_013140465.1_ASM1314046v1

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Seq: JABFST010000372.1 Methylococcaceae bacterium isolate WB-IL-19 seq_1395, whole genome shotgun sequence (18475 bp)
Overview 1 RT 1: 10136-16518 bp Neighborhood of RT #1 [10136, 16523] PRK11524 TIR_2 YfmG RVT-DGRs Avd_like pfam13191 YfmG Feature: gene Location: 10136-11020 bp Feature: domain Description: PRK11524 Location: 10163-10985 bp Feature: domain Description: PRK1 1 524 Location: 1 01 63-1 0985 bp Feature: gene Location: 11363-12517 bp Feature: domain Description: TIR_2 Location: 11375-11693 bp Feature: domain Description: TIR_2 Location: 1 1 375-1 1 693 bp Feature: domain Description: YfmG Location: 11810-12512 bp Feature: domain Description: YfmG Location: 1 1 81 0-1 251 2 bp Feature: gene Location: 12844-13908 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 13051-13693 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1 3051 -1 3693 bp Feature: gene Location: 13905-14258 bp Feature: domain Description: Avd_like Location: 13932-14235 bp Feature: domain Description: Avd_like Location: 1 3932-1 4235 bp Feature: gene Location: 14337-16523 bp Feature: domain Description: pfam13191 Location: 14406-14859 bp Feature: domain Description: pfam1 31 91 Location: 1 4406-1 4859 bp Feature: domain Description: YfmG Location: 15660-16518 bp Feature: domain Description: YfmG Location: 1 5660-1 651 8 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK11524 (adenine-specific DNA-methyltransferase), TIR_2 (pfam13676), YfmG (COG1262), RVT-DGRs, Avd_like (cd16376), pfam13191 (AAA_16;AAA ATPase domain)

Seq: JABFST010000317.1 Methylococcaceae bacterium isolate WB-IL-19 seq_1540, whole genome shotgun sequence (17247 bp)
Overview 1 RT 1: 6547-10156 bp Neighborhood of RT #1 [6547, 10156] Cas2_I_II_III Cas1_I-II-III RVT-CRISPR Cas_Cas1 Feature: gene Location: 6547-6735 bp Feature: domain Description: Cas2_I_II_III Location: 6550-6676 bp Feature: domain Description: Cas2 _I_II_III Location: 6550-6676 bp Feature: gene Location: 6822-7202 bp Feature: domain Description: Cas1_I-II-III Location: 6828-7164 bp Feature: domain Description: Cas1_I-II-III Location: 682 8-7164 bp Feature: gene Location: 7382-8845 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 7595-8198 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 7595-8198 bp Feature: domain Description: Cas_Cas1 Location: 8447-8825 bp Feature: domain Description: Cas_Cas1 Location: 8447-882 5 bp Feature: gene Location: 9069-9506 bp Feature: gene Location: 9845-10156 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Cas2_I_II_III (cl11442), Cas1_I-II-III (cl00656), RVT-CRISPR, Cas_Cas1 (pfam01867)

Seq: JABFST010000310.1 Methylococcaceae bacterium isolate WB-IL-19 seq_25262, whole genome shotgun sequence (3397 bp)
Overview 1 RT 1: 1-3378 bp Neighborhood of RT #1 [1, 3378] YfmG RVT-GII GIIM RVT-GII Feature: gene Location: 1-180 bp Feature: gene Location: 390-1253 bp Feature: domain Description: YfmG Location: 513-1182 bp Feature: domain Description: YfmG Location: 513 -1182 bp Feature: gene Location: 1586-2311 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1589-1958 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1589-1958 bp Feature: domain Description: GIIM Note: maturase Location: 2000-2207 bp Feature: domain Description: GIIM Note: maturase Location: 2000-2207 bp Feature: gene Location: 2314-2958 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2686-2911 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2686-2911 bp Feature: gene Location: 3229-3378 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YfmG (COG1262), RVT-GII, GIIM (pfam08388)

Seq: JABFST010000436.1 Methylococcaceae bacterium isolate WB-IL-19 seq_3482, whole genome shotgun sequence (10037 bp)
Overview 1 RT 1: 2-1671 bp Neighborhood of RT #1 [2, 1671] RVT-GII Feature: gene Location: 2-1210 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 260-950 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 260-950 bp Feature: gene Location: 1237-1428 bp Feature: gene Location: 1480-1671 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: JABFST010000078.1 Methylococcaceae bacterium isolate WB-IL-19 seq_7396, whole genome shotgun sequence (6332 bp)
Overview 1 RT 1: 1591-6324 bp Neighborhood of RT #1 [1591, 6329] COG2405 RVT-GII GIIM CuRO_1_2DMCO_NIR_like CuRO_1_LCC_like Feature: gene Location: 1591-2073 bp Feature: domain Description: COG2405 Location: 1600-2053 bp Feature: domain Description: COG2405 Location: 1600-205 3 bp Feature: gene Location: 2295-2552 bp Feature: gene Location: 2832-3572 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3000-3534 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3000-35 34 bp Feature: gene Location: 3741-4031 bp Feature: domain Description: GIIM Note: maturase Location: 3747-3927 bp Feature: domain Description: GIIM Note: maturase Location: 3747-3927 bp Feature: gene Location: 5157-6329 bp Feature: domain Description: CuRO_1_2DMCO_NIR_like Location: 5601-5970 bp Feature: domain Description: CuRO_1_2DMCO_NIR_like Location: 5 601-5 970 bp Feature: domain Description: CuRO_1_LCC_like Location: 6237-6324 bp Feature: domain Description: CuRO_1_LCC_like Location: 6237-6324 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG2405 (Predicted nucleic acid-binding protein, contains PIN domain ), RVT-GII, GIIM (pfam08388), CuRO_1_2DMCO_NIR_like (cd11024), CuRO_1_LCC_like (cd04206)

Seq: JABFST010000498.1 Methylococcaceae bacterium isolate WB-IL-19 seq_7924, whole genome shotgun sequence (6096 bp)
Overview 1 RT 1: 3-1345 bp Neighborhood of RT #1 [3, 1530] GIIM RVT-GII CxxCG_CxxCG_HTH Feature: gene Location: 3-308 bp Feature: domain Description: GIIM Note: maturase Location: 9-141 bp Feature: domain Description: GIIM Note: maturase Location: 9-141 bp Feature: gene Location: 305-493 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 311-392 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 311-392 bp Feature: gene Location: 513-974 bp Feature: gene Location: 967-1530 bp Feature: domain Description: CxxCG_CxxCG_HTH Location: 985-1345 bp Feature: domain Description: CxxCG_CxxCG_HTH Location: 985-1345 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT GIIM (pfam08388), RVT-GII, CxxCG_CxxCG_HTH (TIGR03830)