myRT

myRT report for GCA_013140705.1_ASM1314070v1

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Seq: JABFSH010000061.1 Methylococcaceae bacterium isolate WB-IL-06 seq_136, whole genome shotgun sequence (67146 bp)
Overview 1 RT 1: 60907-64418 bp Neighborhood of RT #1 [60907, 64420] PseudoU_synth_EcTruD RAYT RVT-GII group_II_RT_mat FKBP_N Feature: gene Location: 60907-61926 bp Feature: domain Description: PseudoU_synth_EcTruD Location: 60967-61918 bp Feature: domain Description: PseudoU_synth_EcTruD Location: 60967-61 91 8 bp Feature: gene Location: 62250-62771 bp Feature: domain Description: RAYT Location: 62388-62718 bp Feature: domain Description: RAYT Location: 62388-6271 8 bp Feature: gene Location: 62901-63473 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 63111-63225 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 631 1 1 -63225 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 63228-63435 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 63228-63435 bp Feature: gene Location: 63439-63828 bp Feature: gene Location: 64175-64420 bp Feature: domain Description: FKBP_N Location: 64202-64418 bp Feature: domain Description: FKBP_N Location: 64202-6441 8 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PseudoU_synth_EcTruD (cd02575), RAYT (COG1943), RVT-GII, group_II_RT_mat (TIGR04416), FKBP_N (pfam01346)

Seq: JABFSH010000041.1 Methylococcaceae bacterium isolate WB-IL-06 seq_171, whole genome shotgun sequence (60082 bp)
Overview 1 RT 1: 99-1604 bp Neighborhood of RT #1 [99, 1633] RVT-GII RAYT HicA_toxin Feature: gene Location: 99-443 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 144-261 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 144-2 61 bp Feature: gene Location: 621-1340 bp Feature: domain Description: RAYT Location: 624-1038 bp Feature: domain Description: RAYT Location: 62 4-1038 bp Feature: gene Location: 1412-1633 bp Feature: domain Description: HicA_toxin Location: 1439-1604 bp Feature: domain Description: HicA_toxin Location: 1439-1604 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, RAYT (COG1943), HicA_toxin (pfam07927)

Seq: JABFSH010000057.1 Methylococcaceae bacterium isolate WB-IL-06 seq_279, whole genome shotgun sequence (46845 bp)
Overview 1 RT 1: 42007-44763 bp Neighborhood of RT #1 [42007, 44771] RAYT HicB RVT-DGRs Avd_like Feature: gene Location: 42007-42726 bp Feature: domain Description: RAYT Location: 42010-42418 bp Feature: domain Description: RAYT Location: 42010-42418 bp Feature: gene Location: 42834-43040 bp Feature: domain Description: HicB Location: 42837-43005 bp Feature: domain Description: HicB Location: 4283 7-43 005 bp Feature: gene Location: 43104-44270 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 43335-44034 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 43 3 3 5-4403 4 bp Feature: gene Location: 44304-44489 bp Feature: gene Location: 44616-44771 bp Feature: domain Description: Avd_like Location: 44625-44763 bp Feature: domain Description: Avd_like Location: 44625-44763 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RAYT (COG1943), HicB (pfam05534), RVT-DGRs, Avd_like (cd16376)

Seq: JABFSH010000053.1 Methylococcaceae bacterium isolate WB-IL-06 seq_44269, whole genome shotgun sequence (2578 bp)
Overview 1 RT 1: 116-2380 bp Neighborhood of RT #1 [116, 2466] RhsA RhsA RVT-GII GIIM Feature: gene Location: 116-1291 bp Feature: domain Description: RhsA Location: 140-449 bp Feature: domain Description: RhsA Location: 14 0-4 4 9 bp Feature: domain Description: RhsA Location: 479-1091 bp Feature: domain Description: RhsA Location: 4 79-1091 bp Feature: gene Location: 1308-1829 bp Feature: gene Location: 1993-2466 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2008-2080 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2008-2080 bp Feature: domain Description: GIIM Note: maturase Location: 2149-2380 bp Feature: domain Description: GIIM Note: maturase Location: 214 9-2380 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RhsA (COG3209), RVT-GII, GIIM (pfam08388)