myRT

myRT report for GCA_013140885.1_ASM1314088v1

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Seq: JABFSC010000114.1 Deltaproteobacteria bacterium isolate S-RSF-IL-11 seq_11215, whole genome shotgun sequence (4157 bp)
Overview 1 RT 1: 275-4155 bp Neighborhood of RT #1 [275, 4154] DEXXQc_SF1 SF1_C_Upf1 MTES_1575 RVT_N RVT-GII Feature: gene Location: 275-3157 bp Feature: domain Description: DEXXQc_SF1 Location: 1328-2150 bp Feature: domain Description: DEXXQc_SF1 Location: 1 328-21 50 bp Feature: domain Description: SF1_C_Upf1 Location: 2159-2690 bp Feature: domain Description: SF1 _C_Upf1 Location: 21 59-2690 bp Feature: domain Description: MTES_1575 Location: 2816-3101 bp Feature: domain Description: MTES_1 575 Location: 281 6-31 01 bp Feature: gene Location: 3248-3490 bp Feature: gene Location: 3630-4154 bp Feature: RT Description: RVT_N Location: 3780-4023 bp Feature: RT Description: RVT_N Location: 3780-4023 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4068-4155 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4068-41 55 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DEXXQc_SF1 (cd18043), SF1_C_Upf1 (cd18808), MTES_1575 (pfam18741), RVT_N (pfam13655), RVT-GII

Seq: JABFSC010000020.1 Deltaproteobacteria bacterium isolate S-RSF-IL-11 seq_14748, whole genome shotgun sequence (3635 bp)
Overview 1 RT 1: 1-3525 bp Neighborhood of RT #1 [1, 3632] RVT_N RVT-GII GIIM HNH Amidohydro_2 Feature: gene Location: 1-141 bp Feature: gene Location: 265-879 bp Feature: gene Location: 745-2409 bp Feature: RT Description: RVT_N Location: 784-1027 bp Feature: RT Description: RVT_N Location: 784-102 7 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1078-1720 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1078-172 0 bp Feature: domain Description: GIIM Note: maturase Location: 1798-2026 bp Feature: domain Description: GIIM Note: maturase Location: 1798-2 02 6 bp Feature: domain Description: HNH Note: nucleases Location: 2257-2389 bp Feature: domain Description: HNH Note: nucleases Location: 2 2 57-2 389 bp Feature: gene Location: 2521-2673 bp Feature: gene Location: 2904-3632 bp Feature: domain Description: Amidohydro_2 Location: 3138-3525 bp Feature: domain Description: Amidohydro_2 Location: 3138-352 5 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Amidohydro_2 (pfam04909), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNH (pfam01844)

Seq: JABFSC010000765.1 Deltaproteobacteria bacterium isolate S-RSF-IL-11 seq_23740, whole genome shotgun sequence (2845 bp)
Overview 1 RT 1: 3-2831 bp Neighborhood of RT #1 [3, 2831] DDE_3 RVT-GII GIIM Feature: gene Location: 3-587 bp Feature: domain Description: DDE_3 Location: 27-468 bp Feature: domain Description: DDE_3 Location: 27-468 bp Feature: gene Location: 663-887 bp Feature: gene Location: 1151-2461 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1436-2078 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 143 6-2078 bp Feature: domain Description: GIIM Note: maturase Location: 2153-2366 bp Feature: domain Description: GIIM Note: maturase Location: 2153 -23 66 bp Feature: gene Location: 2460-2831 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), DDE_3 (pfam13358)

Seq: JABFSC010000098.1 Deltaproteobacteria bacterium isolate S-RSF-IL-11 seq_24031, whole genome shotgun sequence (2828 bp)
Overview 1 RT 1: 88-2827 bp Neighborhood of RT #1 [88, 2827] RVT-GII GIIM Feature: gene Location: 88-762 bp Feature: gene Location: 1214-2512 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1469-2138 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14 69-2138 bp Feature: domain Description: GIIM Note: maturase Location: 2216-2423 bp Feature: domain Description: GIIM Note: maturase Location: 2216-24 23 bp Feature: gene Location: 2615-2827 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)