myRT

myRT report for GCA_013141065.1_ASM1314106v1

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Seq: JABFRR010000008.1 Bacteriovoracaceae bacterium isolate P-RSF-NP-05 c_000000007057, whole genome shotgun sequence (645772 bp)
Overview 1 RT 1: 3-7813 bp Neighborhood of RT #1 [3, 8055] DUF45 COG0610 SWI2_SNF2 DEAD-like_helicase_C DUF3387 RVT-UG15 RMtype1_S_EcoJA65PI-TRD1-CR1_like RMtype1_S_EcoJA65PI-TRD1-CR1_like YhcG Feature: gene Location: 3-653 bp Feature: domain Description: DUF45 Location: 69-648 bp Feature: domain Description: DUF45 Location: 69-648 bp Feature: gene Location: 653-3838 bp Feature: domain Description: COG0610 Location: 770-1397 bp Feature: domain Description: COG061 0 Location: 770-1 397 bp Feature: domain Description: SWI2_SNF2 Location: 1595-2273 bp Feature: domain Description: SWI2_SNF2 Location: 1 595-2273 bp Feature: domain Description: DEAD-like_helicase_C Location: 2624-2765 bp Feature: domain Description: DEAD-like_helicase_C Location: 2624-2765 bp Feature: domain Description: DUF3387 Location: 3017-3806 bp Feature: domain Description: DUF3387 Location: 301 7-3806 bp Feature: gene Location: 3846-5393 bp Feature: RT Description: RVT-UG15 Note: UG15 RT Location: 4284-4692 bp Feature: RT Description: RVT-UG1 5 Note: UG1 5 RT Location: 4284-4692 bp Feature: gene Location: 5390-6577 bp Feature: domain Description: RMtype1_S_EcoJA65PI-TRD1-CR1_like Location: 5738-5900 bp Feature: domain Description: RMtype1 _S_EcoJA65PI-TRD1 -CR1 _like Location: 5738-5900 bp Feature: domain Description: RMtype1_S_EcoJA65PI-TRD1-CR1_like Location: 6002-6542 bp Feature: domain Description: RMtype1 _S_EcoJA65PI-TRD1 -CR1 _like Location: 6002-6542 bp Feature: gene Location: 6865-8055 bp Feature: domain Description: YhcG Location: 7333-7813 bp Feature: domain Description: YhcG Location: 7333-781 3 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF45 (pfam01863), COG0610 (Type I site-specific restriction-modification system, R (restriction) subunit and related helicases ), SWI2_SNF2 (pfam18766), DEAD-like_helicase_C (cl38915), DUF3387 (pfam11867), RVT-UG15, RMtype1_S_EcoJA65PI-TRD1-CR1_like (cd17256), YhcG (COG4804)