myRT

myRT report for GCA_013141335.1_ASM1314133v1

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Seq: JABFRD010000363.1 Methyloglobulus sp. isolate P-RSF-IL-14 seq_304, whole genome shotgun sequence (45133 bp)
Overview 1 RT 1: 23903-27531 bp Neighborhood of RT #1 [23903, 27623] RVT_N RVT-GII GIIM PRK08182 Feature: gene Location: 23903-24124 bp Feature: gene Location: 24151-24330 bp Feature: gene Location: 24440-26179 bp Feature: domain Description: RVT_N Location: 24545-24785 bp Feature: domain Description: RVT_N Location: 24545-24785 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 24833-25478 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 24833-25478 bp Feature: domain Description: GIIM Note: maturase Location: 25529-25763 bp Feature: domain Description: GIIM Note: maturase Location: 25529-25763 bp Feature: gene Location: 26459-26896 bp Feature: gene Location: 27153-27623 bp Feature: domain Description: PRK08182 Location: 27156-27531 bp Feature: domain Description: PRK081 82 Location: 271 56-27531 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), PRK08182 (single-stranded DNA-binding protein; Provisional)

Seq: JABFRD010000127.1 Methyloglobulus sp. isolate P-RSF-IL-14 seq_4230, whole genome shotgun sequence (7006 bp)
Overview 1 RT 1: 323-4831 bp Neighborhood of RT #1 [323, 4866] DUF3387 RVT-UG15 COG0610 COG3177 Feature: gene Location: 323-949 bp Feature: domain Description: DUF3387 Location: 350-932 bp Feature: domain Description: DUF3387 Location: 350-932 bp Feature: gene Location: 946-2532 bp Feature: RT Description: RVT-UG15 Note: UG15 RT Location: 1450-1846 bp Feature: RT Description: RVT-UG15 Note: UG15 RT Location: 1450-1846 bp Feature: gene Location: 2552-3721 bp Feature: domain Description: COG0610 Location: 2567-3695 bp Feature: domain Description: COG0610 Location: 2 567-3695 bp Feature: gene Location: 3724-4866 bp Feature: domain Description: COG3177 Location: 3829-4831 bp Feature: domain Description: COG3177 Location: 382 9-4831 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF3387 (pfam11867), RVT-UG15, COG0610 (Type I site-specific restriction-modification system, R (restriction) subunit and related helicases ), COG3177 (Fic family protein )

Seq: JABFRD010000460.1 Methyloglobulus sp. isolate P-RSF-IL-14 seq_702, whole genome shotgun sequence (24001 bp)
Overview 1 RT 1: 15776-21069 bp Neighborhood of RT #1 [15776, 21080] PRK13888 YhcG RVT-UG13 RMtype1_S_SonII-TRD2-CR2_like RMtype1_S_SonII-TRD2-CR2_like COG2361 Feature: gene Location: 15776-16270 bp Feature: domain Description: PRK13888 Location: 15800-16253 bp Feature: domain Description: PRK13 888 Location: 15800-16253 bp Feature: gene Location: 16328-17359 bp Feature: domain Description: YhcG Location: 16640-17123 bp Feature: domain Description: YhcG Location: 16640-17123 bp Feature: gene Location: 17605-18972 bp Feature: RT Description: RVT-UG13 Note: UG13 RT Location: 18013-18478 bp Feature: RT Description: RVT-UG13 Note: UG13 RT Location: 18013 -18478 bp Feature: gene Location: 18977-20728 bp Feature: domain Description: RMtype1_S_SonII-TRD2-CR2_like Location: 19241-19784 bp Feature: domain Description: RMtype1_S_SonII-TRD2-CR2_like Location: 19241-19784 bp Feature: domain Description: RMtype1_S_SonII-TRD2-CR2_like Location: 20111-20696 bp Feature: domain Description: RMtype1_S_SonII-TRD2-CR2_like Location: 20111-20696 bp Feature: gene Location: 20730-21080 bp Feature: domain Description: COG2361 Location: 20733-21069 bp Feature: domain Description: COG23 61 Location: 2073 3 -21069 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK13888 (conjugal transfer protein TrbN; Provisional), YhcG (COG4804), RVT-UG13, RMtype1_S_SonII-TRD2-CR2_like (cd17246), COG2361 (Uncharacterized conserved protein, contains HEPN domain )