myRT

myRT report for GCA_013141385.1_ASM1314138v1

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Seq: JABFRB010000029.1 Bacteroidales bacterium isolate P-RSF-IL-12 seq_706, whole genome shotgun sequence (23924 bp)
Overview 1 RT 1: 13238-19535 bp Neighborhood of RT #1 [13238, 19535] MoxR RVT-UG9 PRK14975 Feature: gene Location: 13238-13657 bp Feature: gene Location: 13664-14665 bp Feature: domain Description: MoxR Location: 13724-14663 bp Feature: domain Description: MoxR Location: 1 3724-1 4663 bp Feature: gene Location: 15208-16851 bp Feature: RT Description: RVT-UG9 Note: UG9 RT Location: 15412-16060 bp Feature: RT Description: RVT-UG9 Note: UG9 RT Location: 1 541 2-1 6060 bp Feature: gene Location: 16855-18450 bp Feature: domain Description: PRK14975 Location: 17050-18385 bp Feature: domain Description: PRK1 4975 Location: 1 7050-1 8385 bp Feature: gene Location: 19020-19535 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MoxR (COG0714), RVT-UG9, PRK14975 (bifunctional 3'-5' exonuclease/DNA polymerase; Provisional)

Seq: JABFRB010000028.1 Bacteroidales bacterium isolate P-RSF-IL-12 seq_73, whole genome shotgun sequence (124963 bp)
Overview 1 RT 1: 100132-108791 bp Neighborhood of RT #1 [100132, 108791] MPN_DUF2466 T_den_put_tspse AE_Prim_S_like RVT-UG10 CarboxypepD_reg Feature: gene Location: 100132-100260 bp Feature: gene Location: 100500-101075 bp Feature: domain Description: MPN_DUF2466 Location: 100515-100818 bp Feature: domain Description: MPN_DUF2 466 Location: 100515-100818 bp Feature: domain Description: T_den_put_tspse Location: 100884-101070 bp Feature: domain Description: T_den_put_tspse Location: 100884-101070 bp Feature: gene Location: 101388-106997 bp Feature: domain Description: AE_Prim_S_like Location: 101514-101787 bp Feature: domain Description: AE_Prim_S_like Location: 101514-101787 bp Feature: RT Description: RVT-UG10 Note: UG10 RT Location: 102771-103434 bp Feature: RT Description: RVT-UG10 Note: UG10 RT Location: 102 771-103434 bp Feature: gene Location: 107323-108219 bp Feature: domain Description: CarboxypepD_reg Location: 107992-108211 bp Feature: domain Description: CarboxypepD_reg Location: 107992 -1082 11 bp Feature: gene Location: 108549-108791 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MPN_DUF2466 (cd08071), T_den_put_tspse (TIGR01784), AE_Prim_S_like (cl01287), RVT-UG10, CarboxypepD_reg (pfam13620)

Seq: JABFRB010000014.1 Bacteroidales bacterium isolate P-RSF-IL-12 seq_9, whole genome shotgun sequence (372558 bp)
Overview 1 RT 1: 224032-229510 bp Neighborhood of RT #1 [224032, 229510] NlpD alaS RVT-Retrons HTH_XRE Feature: gene Location: 224032-225006 bp Feature: domain Description: NlpD Location: 224536-224917 bp Feature: domain Description: NlpD Location: 22453 6-224917 bp Feature: gene Location: 225156-227774 bp Feature: domain Description: alaS Location: 225159-227763 bp Feature: domain Description: alaS Location: 225159-227763 bp Feature: gene Location: 228072-228935 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 228249-228771 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 228249-228771 bp Feature: gene Location: 228928-229218 bp Feature: domain Description: HTH_XRE Location: 228940-229102 bp Feature: domain Description: HTH_XRE Location: 228940-229102 bp Feature: gene Location: 229286-229510 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT NlpD (COG0739), alaS (TIGR00344), RVT-Retrons, HTH_XRE (smart00530)