myRT

myRT report for GCA_013141785.1_ASM1314178v1

Download annotations/find similar RTs

Seq: WHOC01000099.1 Paenibacillus sp. LMG 31460 Contig_118_230.089, whole genome shotgun sequence (1408 bp)
Overview 1 RT 1: 1-1246 bp Neighborhood of RT #1 [1, 1248] RVT-GII GIIM Feature: gene Location: 1-1248 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 307-943 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 307-943 bp Feature: domain Description: GIIM Note: maturase Location: 1021-1246 bp Feature: domain Description: GIIM Note: maturase Location: 1 021 -1 246 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: WHOC01000195.1 Paenibacillus sp. LMG 31460 Contig_235_54.5492, whole genome shotgun sequence (54496 bp)
Overview 1 RT 1: 11942-19823 bp Neighborhood of RT #1 [11942, 19930] PRK03612 metH RVT-GII UbiG MFS_MMR_MDR_like Feature: gene Location: 11942-12898 bp Feature: domain Description: PRK03612 Location: 12065-12860 bp Feature: domain Description: PRK03612 Location: 12 065-12 860 bp Feature: gene Location: 13006-16449 bp Feature: domain Description: metH Location: 13039-16438 bp Feature: domain Description: metH Location: 13039-16438 bp Feature: gene Location: 16628-17554 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16829-17483 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1682 9-17483 bp Feature: gene Location: 17676-18542 bp Feature: domain Description: UbiG Location: 17838-18123 bp Feature: domain Description: UbiG Location: 17838-1812 3 bp Feature: gene Location: 18545-19930 bp Feature: domain Description: MFS_MMR_MDR_like Location: 18584-19823 bp Feature: domain Description: MFS_MMR_MDR_like Location: 18584-1982 3 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK03612 (polyamine aminopropyltransferase), metH (TIGR02082), RVT-GII, UbiG (TIGR01983), MFS_MMR_MDR_like (cd17504)

Seq: WHOC01000026.1 Paenibacillus sp. LMG 31460 Contig_24_58.5375, whole genome shotgun sequence (3367 bp)
Overview 1 RT 1: 1-3005 bp Neighborhood of RT #1 [1, 3028] SLH SLH SLH RVT-GII RVT-GII KOG4768 Feature: gene Location: 1-747 bp Feature: domain Description: SLH Location: 208-334 bp Feature: domain Description: SLH Location: 208-3 3 4 bp Feature: domain Description: SLH Location: 391-514 bp Feature: domain Description: SLH Location: 3 91-514 bp Feature: domain Description: SLH Location: 571-688 bp Feature: domain Description: SLH Location: 571-688 bp Feature: gene Location: 1095-1247 bp Feature: gene Location: 1459-2169 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1921-2098 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1921-2098 bp Feature: gene Location: 2183-2782 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2312-2549 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23 12-2549 bp Feature: gene Location: 2849-3028 bp Feature: domain Description: KOG4768 Location: 2852-3005 bp Feature: domain Description: KOG4768 Location: 2852-3 005 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, SLH (pfam00395), KOG4768 (KOG4768, Mitochondrial mRNA maturase )