myRT

myRT report for GCA_013150915.1_ASM1315091v1

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Seq: JAADJE010000054.1 Gammaproteobacteria bacterium isolate M_MetaBat.99 contig-127_17074, whole genome shotgun sequence (7644 bp)
Overview 1 RT 1: 545-5957 bp Neighborhood of RT #1 [545, 5995] Resolvase Recombinase Zn_ribbon_recom YafY RVT-GII GIIM DUF772 DDE_Tnp_1 MR_like Feature: gene Location: 545-2308 bp Feature: domain Description: Resolvase Location: 557-995 bp Feature: domain Description: Resolvase Location: 557-995 bp Feature: domain Description: Recombinase Location: 1082-1445 bp Feature: domain Description: Recombinase Location: 1 082-1 445 bp Feature: domain Description: Zn_ribbon_recom Location: 1484-1673 bp Feature: domain Description: Zn_ribbon_recom Location: 1 484-1 673 bp Feature: gene Location: 2458-2790 bp Feature: domain Description: YafY Location: 2485-2767 bp Feature: domain Description: YafY Location: 2485-2767 bp Feature: gene Location: 2950-3561 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2959-3172 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2959-31 72 bp Feature: domain Description: GIIM Note: maturase Location: 3253-3457 bp Feature: domain Description: GIIM Note: maturase Location: 3253-3457 bp Feature: gene Location: 3545-4759 bp Feature: domain Description: DUF772 Location: 3632-3743 bp Feature: domain Description: DUF772 Location: 3632-3743 bp Feature: domain Description: DDE_Tnp_1 Location: 4199-4595 bp Feature: domain Description: DDE_Tnp_1 Location: 41 99-4595 bp Feature: gene Location: 4805-5995 bp Feature: domain Description: MR_like Location: 4856-5957 bp Feature: domain Description: MR_like Location: 4856-5957 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YafY (COG2378), RVT-GII, GIIM (pfam08388), DUF772 (pfam05598), DDE_Tnp_1 (pfam01609), MR_like (cd03316), Resolvase (smart00857), Recombinase (pfam07508), Zn_ribbon_recom (pfam13408)