myRT

myRT report for GCA_013155035.1_ASM1315503v1

Download annotations/find similar RTs

Seq: JABJUO010000043.1 Klebsiella pneumoniae strain UCO519 NODE_43, whole genome shotgun sequence (14152 bp)
Overview 1 RT 1: 6115-9299 bp Neighborhood of RT #1 [6115, 9299] PRK10276 RVT-GII Feature: gene Location: 6115-6540 bp Feature: domain Description: PRK10276 Location: 6118-6526 bp Feature: domain Description: PRK1 0276 Location: 61 1 8-6526 bp Feature: gene Location: 6658-6891 bp Feature: gene Location: 6942-8453 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7347-8061 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7347-8061 bp Feature: gene Location: 8687-8917 bp Feature: gene Location: 8976-9299 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII

Seq: JABJUO010000005.1 Klebsiella pneumoniae strain UCO519 NODE_5, whole genome shotgun sequence (272328 bp)
Overview 1 RT 1: 265328-272162 bp Neighborhood of RT #1 [265328, 272185] FimC FimD RVT-UG4 EAL Feature: gene Location: 265328-266056 bp Feature: domain Description: FimC Location: 265376-266039 bp Feature: domain Description: FimC Location: 2 65376-2 66039 bp Feature: gene Location: 266088-268697 bp Feature: domain Description: FimD Location: 266145-268686 bp Feature: domain Description: FimD Location: 2 66145-2 68686 bp Feature: gene Location: 268697-270727 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 269105-269549 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 2 69105-2 69549 bp Feature: gene Location: 271364-272185 bp Feature: domain Description: EAL Location: 272048-272162 bp Feature: domain Description: EAL Location: 2 72 048-2 72 162 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FimC (COG3121), FimD (COG3188), RVT-UG4, EAL (smart00052)

Seq: JABJUO010000062.1 Klebsiella pneumoniae strain UCO519 NODE_62, whole genome shotgun sequence (1893 bp)
Overview 1 RT 1: 60-1892 bp Neighborhood of RT #1 [60, 1892] RVT-GII Feature: gene Location: 60-1547 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 465-1155 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 465-1155 bp Feature: gene Location: 1701-1892 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII