myRT

myRT report for GCA_013155195.1_ASM1315519v1

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Seq: JABJTT010000017.1 Corallococcus exiguus strain AB038A NODE_17_length_73678_cov_28.304, whole genome shotgun sequence (73678 bp)
Overview 1 RT 1: 8748-13983 bp Neighborhood of RT #1 [8748, 13985] AraC_binding AraC YdfG RVT-Retrons COG4099 COG4099 Feature: gene Location: 8748-9566 bp Feature: domain Description: AraC_binding Location: 8841-9201 bp Feature: domain Description: AraC_binding Location: 8841 -9201 bp Feature: domain Description: AraC Location: 9255-9558 bp Feature: domain Description: AraC Location: 9255-9558 bp Feature: gene Location: 9743-10480 bp Feature: domain Description: YdfG Location: 9746-10475 bp Feature: domain Description: YdfG Location: 9746-1 0475 bp Feature: gene Location: 10722-12068 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 11184-11838 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 1 1 84-1 1 838 bp Feature: gene Location: 12079-12876 bp Feature: gene Location: 13077-13985 bp Feature: domain Description: COG4099 Location: 13131-13722 bp Feature: domain Description: COG4099 Location: 1 31 31 -1 3722 bp Feature: domain Description: COG4099 Location: 13908-13983 bp Feature: domain Description: COG4099 Location: 1 3908-1 3983 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, COG4099 (Predicted peptidase ), AraC_binding (pfam02311), AraC (COG2207), YdfG (COG4221)

Seq: JABJTT010000216.1 Corallococcus exiguus strain AB038A NODE_216_length_16238_cov_32.6807, whole genome shotgun sequence (16238 bp)
Overview 1 RT 1: 6012-15998 bp Neighborhood of RT #1 [6012, 16237] WD40 HEAT_2 HEAT_2 HEAT_2 HEAT_2 HEAT_2 HEAT_2 HEAT_2 HEAT_2 HEAT_2 HEAT_2 HEAT_2 HEAT_2 SWIM RVT-Retrons Feature: gene Location: 6012-12545 bp Feature: domain Description: WD40 Location: 6042-6927 bp Feature: domain Description: WD40 Location: 6042 -692 7 bp Feature: domain Description: HEAT_2 Location: 7095-7269 bp Feature: domain Description: HEAT_2 Location: 7095-72 69 bp Feature: domain Description: HEAT_2 Location: 7851-8100 bp Feature: domain Description: HEAT_2 Location: 7851-8100 bp Feature: domain Description: HEAT_2 Location: 8238-8481 bp Feature: domain Description: HEAT_2 Location: 82 38-8481 bp Feature: domain Description: HEAT_2 Location: 8949-9162 bp Feature: domain Description: HEAT_2 Location: 8949-9162 bp Feature: domain Description: HEAT_2 Location: 9294-9417 bp Feature: domain Description: HEAT_2 Location: 92 94-9417 bp Feature: domain Description: HEAT_2 Location: 9882-10041 bp Feature: domain Description: HEAT_2 Location: 9882 -10041 bp Feature: domain Description: HEAT_2 Location: 10065-10275 bp Feature: domain Description: HEAT_2 Location: 10065-102 75 bp Feature: domain Description: HEAT_2 Location: 10326-10542 bp Feature: domain Description: HEAT_2 Location: 1032 6-10542 bp Feature: domain Description: HEAT_2 Location: 10755-10911 bp Feature: domain Description: HEAT_2 Location: 10755-10911 bp Feature: domain Description: HEAT_2 Location: 11295-11532 bp Feature: domain Description: HEAT_2 Location: 112 95-11532 bp Feature: domain Description: HEAT_2 Location: 12036-12189 bp Feature: domain Description: HEAT_2 Location: 12 036-12 189 bp Feature: domain Description: HEAT_2 Location: 12327-12480 bp Feature: domain Description: HEAT_2 Location: 12 32 7-12 480 bp Feature: gene Location: 12542-14401 bp Feature: domain Description: SWIM Location: 14012-14096 bp Feature: domain Description: SWIM Location: 14012 -14096 bp Feature: gene Location: 14801-16237 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 15356-15998 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 15356-15998 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SWIM (pfam04434), RVT-Retrons, WD40 (smart00320), HEAT_2 (pfam13646)