myRT

myRT report for GCA_013155555.1_ASM1315555v1

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Seq: JABJTR010000271.1 Pyxidicoccus fallax strain CA059B NODE_271_length_15995_cov_13.8981, whole genome shotgun sequence (15995 bp)
Overview 1 RT 1: 2582-15094 bp Neighborhood of RT #1 [2582, 15441] BetA BetA BetA DAP2 RVT-Retrons KOG0266 KOG0266 HEAT_2 HEAT_2 HEAT_2 HEAT_2 HEAT_2 HEAT_2 HEAT_2 HEAT_2 HEAT_2 HEAT_2 HEAT_2 Feature: gene Location: 2582-4108 bp Feature: domain Description: BetA Location: 2591-3095 bp Feature: domain Description: BetA Location: 2591 -3095 bp Feature: domain Description: BetA Location: 3212-3542 bp Feature: domain Description: BetA Location: 321 2-3542 bp Feature: domain Description: BetA Location: 3674-4088 bp Feature: domain Description: BetA Location: 3674-4088 bp Feature: gene Location: 4249-5115 bp Feature: domain Description: DAP2 Location: 4375-4954 bp Feature: domain Description: DAP2 Location: 4375-4954 bp Feature: gene Location: 5119-6576 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 5677-6319 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 5677-631 9 bp Feature: gene Location: 6980-8830 bp Feature: gene Location: 8827-15441 bp Feature: domain Description: KOG0266 Location: 8995-9436 bp Feature: domain Description: KOG0266 Location: 8995-9436 bp Feature: domain Description: KOG0266 Location: 9508-9682 bp Feature: domain Description: KOG0266 Location: 9508-9682 bp Feature: domain Description: HEAT_2 Location: 9904-10120 bp Feature: domain Description: HEAT_2 Location: 9904-1 01 20 bp Feature: domain Description: HEAT_2 Location: 10669-10921 bp Feature: domain Description: HEAT_2 Location: 1 0669-1 0921 bp Feature: domain Description: HEAT_2 Location: 10960-11158 bp Feature: domain Description: HEAT_2 Location: 1 0960-1 1 1 58 bp Feature: domain Description: HEAT_2 Location: 11158-11362 bp Feature: domain Description: HEAT_2 Location: 1 1 1 58-1 1 362 bp Feature: domain Description: HEAT_2 Location: 11824-11980 bp Feature: domain Description: HEAT_2 Location: 1 1 824-1 1 980 bp Feature: domain Description: HEAT_2 Location: 12100-12235 bp Feature: domain Description: HEAT_2 Location: 1 21 00-1 2235 bp Feature: domain Description: HEAT_2 Location: 12730-12961 bp Feature: domain Description: HEAT_2 Location: 1 2730-1 2961 bp Feature: domain Description: HEAT_2 Location: 13006-13237 bp Feature: domain Description: HEAT_2 Location: 1 3006-1 3237 bp Feature: domain Description: HEAT_2 Location: 13378-13651 bp Feature: domain Description: HEAT_2 Location: 1 3378-1 3651 bp Feature: domain Description: HEAT_2 Location: 14113-14359 bp Feature: domain Description: HEAT_2 Location: 1 41 1 3-1 4359 bp Feature: domain Description: HEAT_2 Location: 14863-15094 bp Feature: domain Description: HEAT_2 Location: 1 4863-1 5094 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT BetA (COG2303), DAP2 (COG1506), RVT-Retrons, KOG0266 (KOG0266, WD40 repeat-containing protein ), HEAT_2 (pfam13646)

Seq: JABJTR010000877.1 Pyxidicoccus fallax strain CA059B NODE_877_length_3910_cov_13.5908, whole genome shotgun sequence (3910 bp)
Overview 1 RT 1: 1-3682 bp Neighborhood of RT #1 [1, 3909] RCC1 RCC1 RCC1 RCC1 RCC1 RCC1 RCC1 RCC1 RCC1 RCC1 RCC1 RCC1 RCC1 rpt_mate_G_obs LRR_AMN1 RVT-Retrons Feature: gene Location: 1-1866 bp Feature: domain Description: RCC1 Location: 13-94 bp Feature: domain Description: RCC1 Location: 13-94 bp Feature: domain Description: RCC1 Location: 103-235 bp Feature: domain Description: RCC1 Location: 103-2 35 bp Feature: domain Description: RCC1 Location: 256-394 bp Feature: domain Description: RCC1 Location: 2 56-394 bp Feature: domain Description: RCC1 Location: 403-544 bp Feature: domain Description: RCC1 Location: 403-544 bp Feature: domain Description: RCC1 Location: 553-694 bp Feature: domain Description: RCC1 Location: 553-694 bp Feature: domain Description: RCC1 Location: 703-811 bp Feature: domain Description: RCC1 Location: 703-811 bp Feature: domain Description: RCC1 Location: 871-1009 bp Feature: domain Description: RCC1 Location: 871-1009 bp Feature: domain Description: RCC1 Location: 1018-1159 bp Feature: domain Description: RCC1 Location: 1018-1159 bp Feature: domain Description: RCC1 Location: 1168-1312 bp Feature: domain Description: RCC1 Location: 1168-1312 bp Feature: domain Description: RCC1 Location: 1321-1459 bp Feature: domain Description: RCC1 Location: 132 1-1459 bp Feature: domain Description: RCC1 Location: 1480-1612 bp Feature: domain Description: RCC1 Location: 1480-1612 bp Feature: domain Description: RCC1 Location: 1621-1762 bp Feature: domain Description: RCC1 Location: 162 1-1762 bp Feature: domain Description: RCC1 Location: 1771-1834 bp Feature: domain Description: RCC1 Location: 1771-1834 bp Feature: gene Location: 1892-2866 bp Feature: domain Description: rpt_mate_G_obs Location: 1907-2021 bp Feature: domain Description: rpt_mate_G_obs Location: 1907-2 02 1 bp Feature: domain Description: LRR_AMN1 Location: 2312-2795 bp Feature: domain Description: LRR_AMN1 Location: 2 312 -2 795 bp Feature: gene Location: 2863-3909 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3091-3682 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3091-3682 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RCC1 (pfam00415), rpt_mate_G_obs (TIGR02996), LRR_AMN1 (sd00034), RVT-Retrons

Seq: JABJTR010000009.1 Pyxidicoccus fallax strain CA059B NODE_9_length_58129_cov_11.5449, whole genome shotgun sequence (58129 bp)
Overview 1 RT 1: 33565-40506 bp Neighborhood of RT #1 [33565, 40592] HEAT_2 HEAT_2 RVT-Retrons DUF2169 DUF4150 Feature: gene Location: 33565-35313 bp Feature: domain Description: HEAT_2 Location: 34333-34612 bp Feature: domain Description: HEAT_2 Location: 3 43 3 3 -3 4612 bp Feature: domain Description: HEAT_2 Location: 34750-35002 bp Feature: domain Description: HEAT_2 Location: 3 4750-3 5002 bp Feature: gene Location: 35310-37004 bp Feature: gene Location: 37272-38921 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 38052-38658 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3 8052-3 8658 bp Feature: gene Location: 38960-39994 bp Feature: domain Description: DUF2169 Location: 39038-39908 bp Feature: domain Description: DUF2169 Location: 3 903 8-3 9908 bp Feature: gene Location: 40128-40592 bp Feature: domain Description: DUF4150 Location: 40188-40506 bp Feature: domain Description: DUF4150 Location: 40188-40506 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HEAT_2 (pfam13646), RVT-Retrons, DUF2169 (pfam09937), DUF4150 (pfam13665)