myRT

myRT report for GCA_013166575.1_ASM1316657v1

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Seq: JABKKE010000001.1 Prevotella sp. PROD PROD_1, whole genome shotgun sequence (407768 bp)
Overview 1 RT 1: 113385-120515 bp Neighborhood of RT #1 [113385, 120532] Relaxase RVT-UG3 RVT-UG8 HTH_XRE HsdM Feature: gene Location: 113385-114326 bp Feature: domain Description: Relaxase Location: 113409-114108 bp Feature: domain Description: Relaxase Location: 1 1 3409-1 1 41 08 bp Feature: gene Location: 114362-114766 bp Feature: gene Location: 114898-116352 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 115372-115888 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 1 1 5372-1 1 5888 bp Feature: gene Location: 116511-118520 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 116952-117405 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 1 1 6952-1 1 7405 bp Feature: gene Location: 118782-118988 bp Feature: domain Description: HTH_XRE Location: 118803-118968 bp Feature: domain Description: HTH_XRE Location: 1 1 8803-1 1 8968 bp Feature: gene Location: 119036-120532 bp Feature: domain Description: HsdM Location: 119387-120515 bp Feature: domain Description: HsdM Location: 1 1 9387-1 2051 5 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Relaxase (pfam03432), RVT-UG3, RVT-UG8, HTH_XRE (smart00530), HsdM (COG0286)

Seq: JABKKE010000009.1 Prevotella sp. PROD PROD_9, whole genome shotgun sequence (140305 bp)
Overview 1 RT 1: 34450-39065 bp Neighborhood of RT #1 [34450, 39065] RVT-DGRs Feature: gene Location: 34450-35952 bp Feature: gene Location: 36093-36227 bp Feature: gene Location: 36374-37774 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 36578-37172 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 36578-37172 bp Feature: gene Location: 37810-38178 bp Feature: gene Location: 38190-39065 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs