myRT

myRT report for GCA_013169095.1_ASM1316909v1

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Seq: SWGC01000001.1 Enterobacter kobei strain C1-19 contig_1_1, whole genome shotgun sequence (279049 bp)
Overview 1 RT 1: 209941-213235 bp Neighborhood of RT #1 [209941, 213235] RVT-UG11 PRK10201 Feature: gene Location: 209941-210276 bp Feature: gene Location: 210899-211078 bp Feature: gene Location: 211276-212037 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 211402-211855 bp Feature: RT Description: RVT-UG1 1 Note: UG1 1 RT Location: 21 1 402-21 1 855 bp Feature: gene Location: 212431-212937 bp Feature: domain Description: PRK10201 Location: 212434-212932 bp Feature: domain Description: PRK1 0201 Location: 21 2434-21 2932 bp Feature: gene Location: 213059-213235 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG11, PRK10201 (G/U mismatch-specific DNA glycosylase)

Seq: SWGC01000056.1 Enterobacter kobei strain C1-19 contig_53_1, whole genome shotgun sequence (1916 bp)
Overview 1 RT 1: 59-1830 bp Neighborhood of RT #1 [59, 1830] RVT-GII Feature: gene Location: 59-1543 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 461-1151 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 461-1151 bp Feature: gene Location: 1597-1830 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: SWGC01000060.1 Enterobacter kobei strain C1-19 contig_57_1, whole genome shotgun sequence (12323 bp)
Overview 1 RT 1: 7445-12311 bp Neighborhood of RT #1 [7445, 12311] PRK15442 COG3666 DDE_Tnp_1_6 RVT-GII GIIM Feature: gene Location: 7445-8326 bp Feature: domain Description: PRK15442 Location: 7544-8249 bp Feature: domain Description: PRK15442 Location: 7544-8249 bp Feature: gene Location: 8576-9895 bp Feature: domain Description: COG3666 Location: 8597-9038 bp Feature: domain Description: COG3 666 Location: 8597-903 8 bp Feature: domain Description: DDE_Tnp_1_6 Location: 9668-9884 bp Feature: domain Description: DDE_Tnp_1_6 Location: 9668-9884 bp Feature: gene Location: 10240-11631 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10498-11230 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10498-1123 0 bp Feature: domain Description: GIIM Note: maturase Location: 11305-11503 bp Feature: domain Description: GIIM Note: maturase Location: 113 05-11503 bp Feature: gene Location: 11940-12311 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK15442 (beta-lactamase TEM; Provisional), COG3666 (Transposase ), DDE_Tnp_1_6 (pfam13751), RVT-GII, GIIM (pfam08388)