myRT

myRT report for GCA_013169715.1_ASM1316971v1

Download annotations/find similar RTs

Seq: SWHJ01000088.1 Klebsiella quasipneumoniae strain C2-129-1 contig_78_1, whole genome shotgun sequence (16551 bp)
Overview 1 RT 1: 78-4501 bp Neighborhood of RT #1 [78, 4501] CoiA RVT-UG17 SLATT_5 Feature: gene Location: 78-290 bp Feature: gene Location: 348-1052 bp Feature: domain Description: CoiA Location: 405-735 bp Feature: domain Description: CoiA Location: 405-735 bp Feature: gene Location: 1426-2796 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 1654-2260 bp Feature: RT Description: RVT-UG1 7 Note: UG1 7 RT Location: 1 654-2260 bp Feature: gene Location: 2786-3325 bp Feature: domain Description: SLATT_5 Location: 2792-3305 bp Feature: domain Description: SLATT_5 Location: 2792-3305 bp Feature: gene Location: 3857-4501 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CoiA (pfam06054), RVT-UG17, SLATT_5 (pfam18160)

Seq: SWHJ01000094.1 Klebsiella quasipneumoniae strain C2-129-1 contig_84_1, whole genome shotgun sequence (11655 bp)
Overview 1 RT 1: 8003-11652 bp Neighborhood of RT #1 [8003, 11654] InsE PHA02517 RVT-GII GIIM PHA02517 IS5 Feature: gene Location: 8003-8308 bp Feature: domain Description: InsE Location: 8012-8282 bp Feature: domain Description: InsE Location: 8012 -82 82 bp Feature: gene Location: 8356-8706 bp Feature: domain Description: PHA02517 Location: 8395-8689 bp Feature: domain Description: PHA02 517 Location: 8395-8689 bp Feature: gene Location: 9349-10869 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9622-10351 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 962 2 -10351 bp Feature: domain Description: GIIM Note: maturase Location: 10423-10624 bp Feature: domain Description: GIIM Note: maturase Location: 1042 3-1062 4 bp Feature: gene Location: 10998-11417 bp Feature: domain Description: PHA02517 Location: 11001-11412 bp Feature: domain Description: PHA02 517 Location: 11001-11412 bp Feature: gene Location: 11436-11654 bp Feature: domain Description: IS5 Location: 11451-11652 bp Feature: domain Description: IS5 Location: 11451-11652 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), IS5 (COG3039)

Seq: SWHJ01000097.1 Klebsiella quasipneumoniae strain C2-129-1 contig_87_1, whole genome shotgun sequence (1691 bp)
Overview 1 RT 1: 58-1153 bp Neighborhood of RT #1 [58, 1545] RVT-GII Feature: gene Location: 58-1545 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 463-1153 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 463 -1153 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII