myRT

myRT report for GCA_013169725.1_ASM1316972v1

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Seq: SWHI01000131.1 Klebsiella pneumoniae strain C2-146-1 contig_114_1, whole genome shotgun sequence (1500 bp)
Overview 1 RT 1: 105-1441 bp Neighborhood of RT #1 [105, 1497] RVT-Retrons COG3950 Feature: gene Location: 105-1070 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 213-810 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 21 3-81 0 bp Feature: gene Location: 1048-1497 bp Feature: domain Description: COG3950 Location: 1228-1441 bp Feature: domain Description: COG3950 Location: 1 228-1 441 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3950 (Predicted ATP-binding protein involved in virulence ), RVT-Retrons

Seq: SWHI01000021.1 Klebsiella pneumoniae strain C2-146-1 contig_20_1, whole genome shotgun sequence (26978 bp)
Overview 1 RT 1: 1385-4495 bp Neighborhood of RT #1 [1385, 4587] lacZ ABC_ATPase RVT-Retrons Phage_integrase Feature: gene Location: 1385-1867 bp Feature: domain Description: lacZ Location: 1388-1865 bp Feature: domain Description: lacZ Location: 1388-1865 bp Feature: gene Location: 1881-2300 bp Feature: domain Description: ABC_ATPase Location: 1926-2097 bp Feature: domain Description: ABC_ATPase Location: 192 6-2 097 bp Feature: gene Location: 2297-3268 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2426-2996 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2 42 6-2 996 bp Feature: gene Location: 3559-3726 bp Feature: gene Location: 3847-4587 bp Feature: domain Description: Phage_integrase Location: 3979-4495 bp Feature: domain Description: Phage_integrase Location: 3979-4495 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT lacZ (PRK09525), ABC_ATPase (pfam09818), RVT-Retrons, Phage_integrase (pfam00589)