myRT

myRT report for GCA_013169755.1_ASM1316975v1

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Seq: SWHK01000145.1 Klebsiella quasipneumoniae strain C1-124 contig_139_1, whole genome shotgun sequence (13735 bp)
Overview 1 RT 1: 3799-8313 bp Neighborhood of RT #1 [3799, 8393] HTH_XRE RVT-Retrons PRK13889 KOG0143 Feature: gene Location: 3799-4014 bp Feature: gene Location: 4105-4386 bp Feature: domain Description: HTH_XRE Location: 4120-4285 bp Feature: domain Description: HTH_XRE Location: 41 20-4285 bp Feature: gene Location: 4379-5479 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4520-5072 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4520-5072 bp Feature: gene Location: 5556-7058 bp Feature: domain Description: PRK13889 Location: 5559-6138 bp Feature: domain Description: PRK1 3889 Location: 5559-61 38 bp Feature: gene Location: 7911-8393 bp Feature: domain Description: KOG0143 Location: 7920-8313 bp Feature: domain Description: KOG01 43 Location: 7920-831 3 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_XRE (smart00530), RVT-Retrons, PRK13889 (conjugal transfer relaxase TraA; Provisional), KOG0143 (KOG0143, Iron/ascorbate family oxidoreductases )

Seq: SWHK01000030.1 Klebsiella quasipneumoniae strain C1-124 contig_27_1, whole genome shotgun sequence (8710 bp)
Overview 1 RT 1: 4899-8102 bp Neighborhood of RT #1 [4899, 8494] umuC PRK10276 RVT-GII Feature: gene Location: 4899-6170 bp Feature: domain Description: umuC Location: 4902-6162 bp Feature: domain Description: umuC Location: 4902 -6162 bp Feature: gene Location: 6170-6982 bp Feature: domain Description: PRK10276 Location: 6602-6965 bp Feature: domain Description: PRK102 76 Location: 6602 -6965 bp Feature: gene Location: 7007-8494 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7412-8102 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7412 -8102 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII